CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PCHAS_142680
(
Plasmodium chabaudi
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PCHAS_142680
T47348_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PCHAS_142680
RRM
181
251
LFVCKLNPITEEDDLKTIFLRFGPIISCNIVKDKVTNNSLQYAFIEFEKKEDCLNAYFEMDNVVIDDRRIH
Links
Other
RRM
family RBPs
Other
Plasmodium chabaudi
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
83285
Helobdella robusta
83285
N
0.704
PBANKA_142500
Plasmodium berghei
PBANKA_142500
N
0.986
PF08_0086
Plasmodium falciparum
PF08_0086
N
0.873
PKH_142610
Plasmodium knowlesi
PKH_142610
N
0.915
PVX_123145
Plasmodium vivax
PVX_123145
N
0.930
PY01794
Plasmodium yoelii
PY01794
N
0.986