CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PKH_142610
(
Plasmodium knowlesi
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PKH_142610
T47476_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PKH_142610
RRM
207
277
LFVCKLNPVTEEEDLKTIFARFGPITSCNIVKDKVTNNSLQYAFVEFEKKEDCLNAYFEMDNVIIDDRRIH
Links
Other
RRM
family RBPs
Other
Plasmodium knowlesi
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PVX_123145
Plasmodium vivax
PVX_123145
N
0.986
PBANKA_142500
Plasmodium berghei
PBANKA_142500
N
0.930
PY01794
Plasmodium yoelii
PY01794
N
0.930
PCHAS_142680
Plasmodium chabaudi
PCHAS_142680
N
0.915
PF08_0086
Plasmodium falciparum
PF08_0086
N
0.873
83285
Helobdella robusta
83285
N
0.732
LOAG_08216
Loa loa
LOAG_08216
N
0.718
PPIL4
Taeniopygia guttata
ENSTGUG00000010655
N
0.704
PPIL4
Anolis carolinensis
ENSACAG00000006936
N
0.704
e_gw.42.57.1
Nematostella vectensis
e_gw.42.57.1
N
0.704
estExt_Genewise1.C_180101
Capitella teleta
estExt_Genewise1.C_180101
N
0.704
PPIL4
Gallus gallus
ENSGALG00000012364
N
0.704
PPIL4
Meleagris gallopavo
ENSMGAG00000012596
N
0.704