Medtr3g159840 (Medicago truncatula)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Medtr3g159840 T54499_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
AT1G76460-TAIR-G
M239_0.6 		Arabidopsis thaliana DGWGUGD RNAcompete
Ray et al.(2013)
RNCMPT00284 		0.868
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr3g159840.1 RRM 31 97

Links

Other RRM family RBPs
Other Medicago truncatula RBPs

114 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R016998 Ailuropoda melanoleuca Ame_R016998 N 0.000
ENSACAG00000012741 Anolis carolinensis ENSACAG00000012741 N 0.000
RBM15 Bos taurus ENSBTAG00000012555 N 0.000
RBM15 Canis familiaris ENSCAFG00000019789 N 0.000
RBM15 Callithrix jacchus ENSCJAG00000003411 N 0.000
rbm15 Danio rerio ENSDARG00000073847 N 0.000
RBM15 Dasypus novemcinctus ENSDNOG00000016207 N 0.000
Rbm15 Dipodomys ordii ENSDORG00000005669 N 0.000
LOC100058541 Equus caballus ENSECAG00000023660 N 0.000
RBM15 Felis catus ENSFCAG00000007674 N 0.000
RBM15 Homo sapiens ENSG00000162775 N 0.000
RBM15 Gasterosteus aculeatus ENSGACG00000007932 N 0.000
RBM15 Gallus gallus ENSGALG00000000401 N 0.000
RBM15 Gorilla gorilla ENSGGOG00000003655 N 0.000
RBM15 Loxodonta africana ENSLAFG00000012897 N 0.000
RBM15 Macropus eugenii ENSMEUG00000015940 N 0.000
ENSMGAG00000013763 Meleagris gallopavo ENSMGAG00000013763 N 0.000
RBM15 Macaca mulatta ENSMMUG00000015020 N 0.000
RBM15 Monodelphis domestica ENSMODG00000001706 N 0.000
Rbm15 Mus musculus ENSMUSG00000048109 N 0.000
RBM15 Oryctolagus cuniculus ENSOCUG00000002434 N 0.000
RBM15 Otolemur garnettii ENSOGAG00000009182 N 0.000
RBM15 Oryzias latipes ENSORLG00000006197 N 0.000
RBM15 Procavia capensis ENSPCAG00000006329 N 0.000
ENSPPYG00000001051 Pongo pygmaeus ENSPPYG00000001051 N 0.000
RBM15 Pan troglodytes ENSPTRG00000001074 N 0.000
RBM15 Pteropus vampyrus ENSPVAG00000007193 N 0.000
RBM15 Sus scrofa ENSSSCG00000006809 N 0.000
RBM15 Tupaia belangeri ENSTBEG00000008339 N 0.000
RBM15 Tetraodon nigroviridis ENSTNIG00000015129 N 0.000
RBM15 Takifugu rubripes ENSTRUG00000002921 N 0.000
RBM15 Tarsius syrichta ENSTSYG00000000106 N 0.000
RBM15 Tursiops truncatus ENSTTRG00000001317 N 0.000