CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM15
(
Gallus gallus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGALG00000000401
T37592_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGALP00000000545
RRM
152
220
SALSDEAVEDGLFHEFKRFGDVSVKISRLPPGTGAADERVAFVNFRRPEDARAAKHARGRLVLYDRPLK
ENSGALP00000000545
RRM
369
438
LFLGNLDITVSETDLRRAFDRFGVITEVDIKRPGRGQTSTYGFLKFENLDMAHRAKLAMSGKVLLRNPIK
ENSGALP00000000545
RRM
450
512
LWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAQAACTHMRGFPLGGPD
Links
Other
RRM
family RBPs
Other
Gallus gallus
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSMGAG00000013763
Meleagris gallopavo
ENSMGAG00000013763
N
1.000
ENSACAG00000012741
Anolis carolinensis
ENSACAG00000012741
N
0.946
RBM15
Monodelphis domestica
ENSMODG00000001706
N
0.936
RBM15
Macropus eugenii
ENSMEUG00000015940
N
0.931
LOC100058541
Equus caballus
ENSECAG00000023660
N
0.921
RBM15
Gorilla gorilla
ENSGGOG00000003655
N
0.921
RBM15
Tupaia belangeri
ENSTBEG00000008339
N
0.921
RBM15
Tursiops truncatus
ENSTTRG00000001317
N
0.921
RBM15
Dasypus novemcinctus
ENSDNOG00000016207
N
0.921
RBM15
Canis familiaris
ENSCAFG00000019789
N
0.921
RBM15
Bos taurus
ENSBTAG00000012555
N
0.921
RBM15
Sus scrofa
ENSSSCG00000006809
N
0.921
Ame_R016998
Ailuropoda melanoleuca
Ame_R016998
N
0.921
RBM15
Pan troglodytes
ENSPTRG00000001074
N
0.921
Rbm15
Mus musculus
ENSMUSG00000048109
N
0.921
RBM15
Oryctolagus cuniculus
ENSOCUG00000002434
N
0.921
RBM15
Macaca mulatta
ENSMMUG00000015020
N
0.921
RBM15
Loxodonta africana
ENSLAFG00000012897
N
0.921
RBM15
Callithrix jacchus
ENSCJAG00000003411
N
0.921
ENSPPYG00000001051
Pongo pygmaeus
ENSPPYG00000001051
N
0.921
RBM15
Homo sapiens
ENSG00000162775
N
0.921
RBM15
Tarsius syrichta
ENSTSYG00000000106
N
0.916
RBM15
Felis catus
ENSFCAG00000007674
N
0.916
RBM15
Pteropus vampyrus
ENSPVAG00000007193
N
0.916
Rbm15
Dipodomys ordii
ENSDORG00000005669
N
0.911
RBM15
Procavia capensis
ENSPCAG00000006329
N
0.906
RBM15
Otolemur garnettii
ENSOGAG00000009182
N
0.896
RBM15
Tetraodon nigroviridis
ENSTNIG00000015129
N
0.877
RBM15
Takifugu rubripes
ENSTRUG00000002921
N
0.864
rbm15
Danio rerio
ENSDARG00000073847
N
0.859
RBM15
Gasterosteus aculeatus
ENSGACG00000007932
N
0.842
RBM15
Oryzias latipes
ENSORLG00000006197
N
0.829
RBM15
Gasterosteus aculeatus
ENSGACG00000001022
N
0.807
RBM15
Takifugu rubripes
ENSTRUG00000007851
N
0.802
RBM15
Oryzias latipes
ENSORLG00000000433
N
0.789
RBM15
Echinops telfairi
ENSETEG00000002452
N
0.782
AAH70824
Xenopus laevis
AAH70824
N
0.782
rbm15
Xenopus tropicalis
ENSXETG00000002029
N
0.777