CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ENSACAG00000012741
(
Anolis carolinensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSACAG00000012741
T34701_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000012492
RRM
134
202
SALSDEAIEDGLFHEFKRFGDVSVKISRLPPGTGAADERVAFVNFRRPEDARAAKHARGRLVLYDRPLK
ENSACAP00000012492
RRM
342
411
LFLGNLDISVTKSDLQRAFDRFGVITEVDLKRPTRGQTSTYGFVKFENLDMAHRAKLAMSGKVLLCNTIK
ENSACAP00000012492
RRM
423
485
LWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAQAACTHMRGFPLGGPD
Links
Other
RRM
family RBPs
Other
Anolis carolinensis
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSMGAG00000013763
Meleagris gallopavo
ENSMGAG00000013763
N
0.946
RBM15
Gallus gallus
ENSGALG00000000401
N
0.946
RBM15
Monodelphis domestica
ENSMODG00000001706
N
0.911
RBM15
Macropus eugenii
ENSMEUG00000015940
N
0.906
ENSPPYG00000001051
Pongo pygmaeus
ENSPPYG00000001051
N
0.891
RBM15
Bos taurus
ENSBTAG00000012555
N
0.891
RBM15
Canis familiaris
ENSCAFG00000019789
N
0.891
RBM15
Pan troglodytes
ENSPTRG00000001074
N
0.891
RBM15
Sus scrofa
ENSSSCG00000006809
N
0.891
Ame_R016998
Ailuropoda melanoleuca
Ame_R016998
N
0.891
RBM15
Tursiops truncatus
ENSTTRG00000001317
N
0.891
RBM15
Tupaia belangeri
ENSTBEG00000008339
N
0.891
RBM15
Loxodonta africana
ENSLAFG00000012897
N
0.891
RBM15
Oryctolagus cuniculus
ENSOCUG00000002434
N
0.891
LOC100058541
Equus caballus
ENSECAG00000023660
N
0.891
RBM15
Dasypus novemcinctus
ENSDNOG00000016207
N
0.891
RBM15
Gorilla gorilla
ENSGGOG00000003655
N
0.891
RBM15
Homo sapiens
ENSG00000162775
N
0.891
RBM15
Callithrix jacchus
ENSCJAG00000003411
N
0.891
RBM15
Felis catus
ENSFCAG00000007674
N
0.886
RBM15
Tarsius syrichta
ENSTSYG00000000106
N
0.886
RBM15
Macaca mulatta
ENSMMUG00000015020
N
0.886
RBM15
Pteropus vampyrus
ENSPVAG00000007193
N
0.886
Rbm15
Mus musculus
ENSMUSG00000048109
N
0.886
Rbm15
Dipodomys ordii
ENSDORG00000005669
N
0.881
RBM15
Procavia capensis
ENSPCAG00000006329
N
0.876
RBM15
Otolemur garnettii
ENSOGAG00000009182
N
0.866
RBM15
Tetraodon nigroviridis
ENSTNIG00000015129
N
0.847
rbm15
Danio rerio
ENSDARG00000073847
N
0.839
RBM15
Takifugu rubripes
ENSTRUG00000002921
N
0.835
RBM15
Gasterosteus aculeatus
ENSGACG00000007932
N
0.828
RBM15
Oryzias latipes
ENSORLG00000006197
N
0.805
RBM15
Gasterosteus aculeatus
ENSGACG00000001022
N
0.802
RBM15
Oryzias latipes
ENSORLG00000000433
N
0.789
RBM15
Takifugu rubripes
ENSTRUG00000007851
N
0.778
rbm15
Xenopus tropicalis
ENSXETG00000002029
N
0.772
AAH70824
Xenopus laevis
AAH70824
N
0.767
RBM15
Echinops telfairi
ENSETEG00000002452
N
0.757