MDP0000043338 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000043338 T57294_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000043338 RRM 8 65
MDP0000043338 RRM 107 169
MDP0000043338 RRM 260 326
MDP0000043338 RRM 370 390

Links

Other RRM family RBPs
Other Malus x domestica RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29863.m001059 Ricinus communis 29863.m001059 N 0.706
cassava19037.valid.m1 Manihot esculenta cassava19037.valid.m1 N 0.708
cassava19038.valid.m1 Manihot esculenta cassava19038.valid.m1 N 0.708
cassava19039.valid.m1 Manihot esculenta cassava19039.valid.m1 N 0.708
cassava19040.valid.m1 Manihot esculenta cassava19040.valid.m1 N 0.708
Cucsa.365870 Cucumis sativus Cucsa.365870 N 0.737
Glyma02g08870.1 Glycine max Glyma02g08870.1 N 0.714
Glyma20g30820.1 Glycine max Glyma20g30820.1 N 0.714
GSVIVG00034558001 Vitis vinifera GSVIVG00034558001 N 0.713
mgf010164m Mimulus guttatus mgf010164m N 0.702
PK14373.1 Cannabis sativa PK14373.1 N 0.757
ppa005775m Prunus persica ppa005775m N 0.776