mgf010164m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf010164m T53676_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf010164m RRM 8 72
mgf010164m RRM 104 169
mgf010164m RRM 252 318
mgf010164m RRM 362 428

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava19039.valid.m1 Manihot esculenta cassava19039.valid.m1 N 0.887
cassava19040.valid.m1 Manihot esculenta cassava19040.valid.m1 N 0.887
cassava19037.valid.m1 Manihot esculenta cassava19037.valid.m1 N 0.887
cassava19038.valid.m1 Manihot esculenta cassava19038.valid.m1 N 0.887
GSVIVG00034558001 Vitis vinifera GSVIVG00034558001 N 0.887
cassava12743.valid.m1 Manihot esculenta cassava12743.valid.m1 N 0.880
29863.m001059 Ricinus communis 29863.m001059 N 0.864
B9H7U5_POPTR Populus trichocarpa POPTR_0005s21660 N 0.850
PK14373.1 Cannabis sativa PK14373.1 N 0.849
ppa005775m Prunus persica ppa005775m N 0.845
Glyma02g08870.1 Glycine max Glyma02g08870.1 N 0.845
chr5.CM0052.230.nd Lotus japonicus chr5.CM0052.230.nd N 0.842
PTB3 Arabidopsis thaliana AT1G43190-TAIR-G N 0.838
XM_002893897.1 Arabidopsis lyrata Al_scaffold_0001_3801 N 0.838
Glyma20g30820.1 Glycine max Glyma20g30820.1 N 0.834
B9GT89_POPTR Populus trichocarpa POPTR_0002s06660 N 0.830
Cucsa.365870 Cucumis sativus Cucsa.365870 N 0.826
Glyma10g36770.1 Glycine max Glyma10g36770.1 N 0.823
Medtr1g124970 Medicago truncatula Medtr1g124970 N 0.823
PDK_20s1358001g002 Phoenix dactylifera PDK_20s1358001g002 N 0.816
BRADI2G24150 Brachypodium distachyon BRADI2G24150 N 0.725
LOC_Os05g36120 Oryza sativa LOC_Os05g36120 N 0.721
LOC_Os01g64770 Oryza sativa LOC_Os01g64770 N 0.721
BRADI2G56120 Brachypodium distachyon BRADI2G56120 N 0.717
SB09G021560 Sorghum bicolor Sb09g021560 N 0.713
GRMZM2G070113 Zea mays GRMZM2G070113 N 0.713
MDP0000043338 Malus x domestica MDP0000043338 N 0.702