Glyma20g30820.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma20g30820.1 T52957_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma20g30820.1 RRM 8 66
Glyma20g30820.1 RRM 103 168
Glyma20g30820.1 RRM 258 324
Glyma20g30820.1 RRM 368 434

Links

Other RRM family RBPs
Other Glycine max RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma10g36770.1 Glycine max Glyma10g36770.1 N 0.977
Glyma02g08870.1 Glycine max Glyma02g08870.1 N 0.942
chr5.CM0052.230.nd Lotus japonicus chr5.CM0052.230.nd N 0.900
Medtr1g124970 Medicago truncatula Medtr1g124970 N 0.896
GSVIVG00034558001 Vitis vinifera GSVIVG00034558001 N 0.882
PK14373.1 Cannabis sativa PK14373.1 N 0.880
Cucsa.365870 Cucumis sativus Cucsa.365870 N 0.869
cassava19038.valid.m1 Manihot esculenta cassava19038.valid.m1 N 0.867
cassava19039.valid.m1 Manihot esculenta cassava19039.valid.m1 N 0.867
cassava19040.valid.m1 Manihot esculenta cassava19040.valid.m1 N 0.867
cassava19037.valid.m1 Manihot esculenta cassava19037.valid.m1 N 0.867
ppa005775m Prunus persica ppa005775m N 0.857
cassava12743.valid.m1 Manihot esculenta cassava12743.valid.m1 N 0.856
29863.m001059 Ricinus communis 29863.m001059 N 0.848
B9H7U5_POPTR Populus trichocarpa POPTR_0005s21660 N 0.846
mgf010164m Mimulus guttatus mgf010164m N 0.834
PDK_20s1358001g002 Phoenix dactylifera PDK_20s1358001g002 N 0.830
PTB3 Arabidopsis thaliana AT1G43190-TAIR-G N 0.823
XM_002893897.1 Arabidopsis lyrata Al_scaffold_0001_3801 N 0.822
B9GT89_POPTR Populus trichocarpa POPTR_0002s06660 N 0.819
LOC_Os01g64770 Oryza sativa LOC_Os01g64770 N 0.729
BRADI2G56120 Brachypodium distachyon BRADI2G56120 N 0.716
MDP0000043338 Malus x domestica MDP0000043338 N 0.714
LOC_Os05g36120 Oryza sativa LOC_Os05g36120 N 0.712
BRADI2G24150 Brachypodium distachyon BRADI2G24150 N 0.710
SB09G021560 Sorghum bicolor Sb09g021560 N 0.710
e_gw1.48.34.1 Physcomitrella patens e_gw1.48.34.1 N 0.707
GRMZM2G052926 Zea mays GRMZM2G052926 N 0.703
GRMZM2G070113 Zea mays GRMZM2G070113 N 0.703