MDP0000294628 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000294628 T57593_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
gw1.219.6.1_CONSTRUCT
M199_0.6 		RNAcompete CONSTRUCTS UGUUUUD RNAcompete
Ray et al.(2013)
RNCMPT00229 		0.700
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000294628 RRM 47 115
MDP0000294628 RRM 138 209
MDP0000294628 RRM 246 310

Links

Other RRM family RBPs
Other Malus x domestica RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PGTG_00139 Puccinia graminis PGTG_00139 N 0.000
PGTG_01495 Puccinia graminis PGTG_01495 N 0.000
PGTG_06037 Puccinia graminis PGTG_06037 N 0.000
PGTG_07378 Puccinia graminis PGTG_07378 N 0.000
PGTG_09899 Puccinia graminis PGTG_09899 N 0.000
PGTG_15933 Puccinia graminis PGTG_15933 N 0.000
PGTG_19705 Puccinia graminis PGTG_19705 N 0.000
PGTG_20179 Puccinia graminis PGTG_20179 N 0.000
PTTG_04859 Puccinia triticina PTTG_04859 N 0.000
PTTG_09799 Puccinia triticina PTTG_09799 N 0.000