CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAH72078
(
Xenopus laevis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AAH72078
T59517_0.6
Xenbase (2010-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAH72078
RRM
8
79
IQVTNVSPSASSEQMITLFGFLGKIEELRLFPPDDSPLPVTSRVCFVKFQDPDSAVVAQHLTNTVFVDRALI
Links
Other
RRM
family RBPs
Other
Xenopus laevis
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_00210
Arthroderma benhamiae
ARB_00210
N
0.000
BDBG_04496
Blastomyces dermatitidis
BDBG_04496
N
0.000
ACLA_031620
Aspergillus clavatus
CADACLAG00003000
N
0.000
AFLA_080640
Aspergillus flavus
CADAFLAG00000846
N
0.000
AFUA_1G02810
Aspergillus fumigatus
CADAFUAG00008733
N
0.000
An01g05350
Aspergillus niger
CADANGAG00000527
N
0.000
ANIA_00298
Aspergillus nidulans
CADANIAG00002417
N
0.000
AO090005000813
Aspergillus oryzae
CADAORAG00002768
N
0.000
ATEG_01945
Aspergillus terreus
CADATEAG00008580
N
0.000
NFIA_021820
Neosartorya fischeri
CADNFIAG00001277
N
0.000
CIMG_04751
Coccidioides immitis
CIMG_04751
N
0.000
CPSG_07754
Coccidioides posadasii
CPSG_07754
N
0.000
gw1.00129.565.1
Aspergillus carbonarius
gw1.00129.565.1
N
0.000
HCAG_04743
Histoplasma capsulatum
HCAG_04743
N
0.000
MCYG_05740
Microsporum canis
MCYG_05740
N
0.000
MGYG_02843
Microsporum gypseum
MGYG_02843
N
0.000
PABG_06223
Paracoccidioides brasiliensis
PABG_06223
N
0.000
Pc22g25210
Penicillium chrysogenum
Pc22g25210
N
0.000
PMAA_051450
Penicillium marneffei
PMAA_051450
N
0.000
TERG_06924
Trichophyton rubrum
TERG_06924
N
0.000
TESG_04667
Trichophyton tonsurans
TESG_04667
N
0.000
TRV_05203
Trichophyton verrucosum
TRV_05203
N
0.000
UREG_06760
Uncinocarpus reesii
UREG_06760
N
0.000