AAH81016 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AAH81016 T59561_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AAH81016 RRM 126 193

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SETD1B Anolis carolinensis ENSACAG00000011162 N 0.912
SETD1B Bos taurus ENSBTAG00000004172 N 0.897
SETD1B Canis familiaris ENSCAFG00000008167 N 0.897
SETD1B Callithrix jacchus ENSCJAG00000016930 N 0.897
setd1ba Danio rerio ENSDARG00000060847 N 0.838
ENSDARG00000078930 Danio rerio ENSDARG00000078930 N 0.838
SETD1B Equus caballus ENSECAG00000006549 N 0.897
SETD1A Echinops telfairi ENSETEG00000014170 N 0.706
SETD1B Homo sapiens ENSG00000139718 N 0.912
SETD1B Gasterosteus aculeatus ENSGACG00000011872 N 0.714
SETD1B Gasterosteus aculeatus ENSGACG00000017002 N 0.750
SET1B_CHICK Gallus gallus ENSGALG00000004324 N 0.941
SETD1B Gorilla gorilla ENSGGOG00000006715 N 0.912
SETD1B Loxodonta africana ENSLAFG00000026518 N 0.882
SETD1A Macropus eugenii ENSMEUG00000003396 N 0.706
SETD1B Meleagris gallopavo ENSMGAG00000004421 N 0.941
ENSMMUG00000012647 Macaca mulatta ENSMMUG00000012647 N 0.912
SETD1A Monodelphis domestica ENSMODG00000001726 N 0.706
SETD1B Monodelphis domestica ENSMODG00000023734 N 0.926
ENSMUSG00000072629 Mus musculus ENSMUSG00000072629 N 0.882
ENSOANG00000006955 Ornithorhynchus anatinus ENSOANG00000006955 N 0.912
SETD1A Ornithorhynchus anatinus ENSOANG00000013155 N 0.721
SETD1B Oryctolagus cuniculus ENSOCUG00000017708 N 0.897
SETD1B Oryzias latipes ENSORLG00000008435 N 0.809
ENSRNOG00000001337 Rattus norvegicus ENSRNOG00000001337 N 0.897
SETD1B Sus scrofa ENSSSCG00000009806 N 0.897
SETD1B Taeniopygia guttata ENSTGUG00000006093 N 0.941
SETD1B Tetraodon nigroviridis ENSTNIG00000009090 N 0.824
SETD1A Tetraodon nigroviridis ENSTNIG00000014930 N 0.706
SETD1B Takifugu rubripes ENSTRUG00000005579 N 0.732
SETD1A Takifugu rubripes ENSTRUG00000008953 N 0.721
SETD1B Takifugu rubripes ENSTRUG00000009533 N 0.779
setd1a Xenopus tropicalis ENSXETG00000001921 N 0.706
setd1b Xenopus tropicalis ENSXETG00000003760 N 0.971
Q66J90 Xenopus laevis Q66J90 N 1.000