PK20504.1 (Cannabis sativa)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		PK20504.1 T00354_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK20504.1 CCCH ZF 203 226
PK20504.1 RRM 367 427

Links

Other CCCH ZF,RRM family RBPs
Other Cannabis sativa RBPs

58 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK01281.1 Cannabis sativa PK01281.1 N 0.776
ppa003564m Prunus persica ppa003564m N 0.871
MDP0000906147 Malus x domestica MDP0000906147 N 0.851
MDP0000214614 Malus x domestica MDP0000214614 N 0.871
Glyma08g43790.1 Glycine max Glyma08g43790.1 N 0.713
cassava7063.valid.m1 Manihot esculenta cassava7063.valid.m1 N 0.859
cassava36931.valid.m1 Manihot esculenta cassava36931.valid.m1 N 0.828
cassava31400.valid.m1 Manihot esculenta cassava31400.valid.m1 N 0.828
cassava31399.valid.m1 Manihot esculenta cassava31399.valid.m1 N 0.828
29223.m000023 Ricinus communis 29223.m000023 N 0.776
27613.m000645 Ricinus communis 27613.m000645 N 0.802
B9IAR9_POPTR Populus trichocarpa POPTR_0014s16340 N 0.839
B9GTF9_POPTR Populus trichocarpa POPTR_0002s22240 N 0.770
GSVIVG00037782001 Vitis vinifera GSVIVG00037782001 N 0.736
XM_002876131.1 Arabidopsis lyrata fgenesh2_kg.5__1664__AT3G52980.1 N 0.759
ppa019338m Prunus persica ppa019338m N 0.793