AT3G51950 (Arabidopsis thaliana)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		AT3G51950-TAIR-G T00381_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT3G51950.1-P CCCH ZF 149 174
AT3G51950.1-P RRM 267 327
AT3G51950.2-P CCCH ZF 149 174
AT3G51950.2-P RRM 267 327

Links

Other CCCH ZF,RRM family RBPs
Other Arabidopsis thaliana RBPs

71 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK01281.1 Cannabis sativa PK01281.1 N 0.000
ppa003564m Prunus persica ppa003564m N 0.000
MDP0000906147 Malus x domestica MDP0000906147 N 0.000
MDP0000214614 Malus x domestica MDP0000214614 N 0.000
Medtr3g077080 Medicago truncatula Medtr3g077080 N 0.000
Glyma14g01930.1 Glycine max Glyma14g01930.1 N 0.000
Glyma08g43790.1 Glycine max Glyma08g43790.1 N 0.000
cassava7063.valid.m1 Manihot esculenta cassava7063.valid.m1 N 0.000
cassava31400.valid.m1 Manihot esculenta cassava31400.valid.m1 N 0.000
cassava31399.valid.m1 Manihot esculenta cassava31399.valid.m1 N 0.000
29223.m000023 Ricinus communis 29223.m000023 N 0.000
27613.m000645 Ricinus communis 27613.m000645 N 0.000
B9IAR9_POPTR Populus trichocarpa POPTR_0014s16340 N 0.000
ppa019338m Prunus persica ppa019338m N 0.713