s_516083 (Phytophthora sojae)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		s_516083 T01002_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
s_516083 RRM 13 83
s_516083 RRM 118 187
s_516083 CCCH ZF 209 233
s_516083 CCCH ZF 277 301
s_516083 CCCH ZF 342 366
s_516083 CCCH ZF 396 419
s_516083 CCCH ZF 441 465

Links

Other CCCH ZF,RRM family RBPs
Other Phytophthora sojae RBPs

3 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CIMG_00383 Coccidioides immitis CIMG_00383 N 0.000
ATEG_08730 Aspergillus terreus CADATEAG00006712 N 0.000
ANIA_04799 Aspergillus nidulans CADANIAG00005622 N 0.000
AFUA_3G06890 Aspergillus fumigatus CADAFUAG00005682 N 0.000
AFLA_101100 Aspergillus flavus CADAFLAG00011847 N 0.000
ACLA_034850 Aspergillus clavatus CADACLAG00004062 N 0.000
UREG_00439 Uncinocarpus reesii UREG_00439 N 0.000
PABG_00859 Paracoccidioides brasiliensis PABG_00859 N 0.000
HCAG_07243 Histoplasma capsulatum HCAG_07243 N 0.000
CPSG_05134 Coccidioides posadasii CPSG_05134 N 0.000
NFIA_070360 Neosartorya fischeri CADNFIAG00005684 N 0.000