estExt_Genewise1.C_30385 (Mucor circinelloides)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 estExt_Genewise1.C_30385 T05110_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_30385 CCCH ZF 71 96

Links

Other CCCH ZF family RBPs
Other Mucor circinelloides RBPs

64 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XP_002158150.1 Hydra magnipapillata XP_002158150.1 N 0.731
estExt_Genewise1Plus.C_sca_12_chr5_2_00446 Nectria haematococca estExt_Genewise1Plus.C_sca_12_chr5_2_00446 N 0.731
estExt_Genewise1Plus.C_31385 Mycosphaerella fijiensis estExt_Genewise1Plus.C_31385 N 0.769
estExt_Genewise1.C_60471 Cochliobolus heterostrophus C5 estExt_Genewise1.C_60471 N 0.808
estExt_Genewise1.C_110154 Neurospora discreta estExt_Genewise1.C_110154 N 0.808
estExt_fgenesh2_kg.C_60126 Thielavia terrestris estExt_fgenesh2_kg.C_60126 N 0.731
estExt_fgenesh1_pm.C_130118 Neurospora tetrasperma estExt_fgenesh1_pm.C_130118 N 0.808
estExt_fgenesh1_pg.C_70448 Myceliophthora thermophila estExt_fgenesh1_pg.C_70448 N 0.731
e_gw1.2.668.1 Sporobolomyces roseus e_gw1.2.668.1 N 0.731
e_gw1.19.91.1 Melampsora laricis populina e_gw1.19.91.1 N 0.769
NCU01795 Neurospora crassa NCU01795 N 0.808
F27D4.4 Caenorhabditis elegans F27D4.4 N 0.731
ZC3H15 Takifugu rubripes ENSTRUG00000004988 N 0.731
ZC3H15 Oryzias latipes ENSORLG00000018606 N 0.731
ZC3H15 Gasterosteus aculeatus ENSGACG00000011648 N 0.731
gw1.1.348.1 Phycomyces blakesleeanus gw1.1.348.1 N 0.731
gwh2.4.391.1 Phanerochaete chrysosporium gwh2.4.391.1 N 0.731
SAKL0E09966g Lachancea kluyveri SAKL0E09966g N 0.769
PMAA_036360 Penicillium marneffei PMAA_036360 N 0.731
Pc21g03130 Penicillium chrysogenum Pc21g03130 N 0.808
Pa_3_8730 Podospora anserina Pa_3_8730 N 0.846
Minc08580 Meloidogyne incognita Minc08580 N 0.731
Kwal_2969 Kluyveromyces waltii Kwal_2969 N 0.731
KLTH0G08162g Kluyveromyces thermotolerans KLTH0G08162g N 0.731
KLLA0C13673g Kluyveromyces lactis KLLA0C13673g N 0.731
fgenesh1_pg.00710_#_148 Aspergillus carbonarius fgenesh1_pg.00710_#_148 N 0.769
estExt_Genewise1.C_22051 Cryphonectria parasitica estExt_Genewise1.C_22051 N 0.808
e_gw1.8.939.1 Pleurotus ostreatus e_gw1.8.939.1 N 0.769
CAGL0J08679g Candida glabrata CAGL0J08679g N 0.769
ACL082W Ashbya gossypii ACL082W N 0.769
AB07703.1 Alternaria brassicicola AB07703.1 N 0.808
zc3h15 Danio rerio ENSDARG00000015889 N 0.731
CRE20408 Caenorhabditis remanei CRE20408 N 0.731
TERG_01412 Trichophyton rubrum TERG_01412 N 0.808
TEQG_08385 Trichophyton equinum TEQG_08385 N 0.808
SS1G_13466 Sclerotinia sclerotiorum SS1G_13466 N 0.731
PTTG_08784 Puccinia triticina PTTG_08784 N 0.769
PGTG_08922 Puccinia graminis PGTG_08922 N 0.808
PABG_07629 Paracoccidioides brasiliensis PABG_07629 N 0.731
MGYG_00125 Microsporum gypseum MGYG_00125 N 0.808
MGG_07010 Magnaporthe oryzae MGG_07010 N 0.846
MCYG_02954 Microsporum canis MCYG_02954 N 0.808
CPSG_09723 Coccidioides posadasii CPSG_09723 N 0.769
CNBG_3113 Cryptococcus neoformans CNBG_3113 N 0.769
CIMG_09790 Coccidioides immitis CIMG_09790 N 0.769
CC1G_07829 Coprinopsis cinerea CC1G_07829 N 0.731
BC1G_06447 Botrytis cinerea BC1G_06447 N 0.731
TESG_03135 Trichophyton tonsurans TESG_03135 N 0.808
TRV_03417 Trichophyton verrucosum TRV_03417 N 0.808
CJA17052 Caenorhabditis japonica CJA17052 N 0.731
CBN11546 Caenorhabditis brenneri CBN11546 N 0.731
CBN03898 Caenorhabditis brenneri CBN03898 N 0.731
CBG00292 Caenorhabditis briggsae CBG00292 N 0.731
NFIA_073040 Neosartorya fischeri CADNFIAG00007899 N 0.808
ATEG_06133 Aspergillus terreus CADATEAG00002525 N 0.846
ANIA_06922 Aspergillus nidulans CADANIAG00007728 N 0.769
An14g05330 Aspergillus niger CADANGAG00011470 N 0.769
AFUA_5G13930 Aspergillus fumigatus CADAFUAG00006431 N 0.808
ACLA_016930 Aspergillus clavatus CADACLAG00000891 N 0.808
DGIL_AUG5s16g7t1 Acyrtosiphon pisum DGIL_AUG5s16g7t1 N 0.731
VDBG_05241 Verticillium albo atrum VDBG_05241 N 0.731
VDAG_08863 Verticillium dahliae VDAG_08863 N 0.731
UREG_04706 Uncinocarpus reesii UREG_04706 N 0.731
ARB_01723 Arthroderma benhamiae ARB_01723 N 0.808