PMAA_036360 (Penicillium marneffei)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 PMAA_036360 T06491_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PMAA_036360.t1 CCCH ZF 93 118

Links

Other CCCH ZF family RBPs
Other Penicillium marneffei RBPs

119 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ANIA_06922 Aspergillus nidulans CADANIAG00007728 N 0.923
AFUA_5G13930 Aspergillus fumigatus CADAFUAG00006431 N 0.885
BC1G_06447 Botrytis cinerea BC1G_06447 N 0.885
NFIA_073040 Neosartorya fischeri CADNFIAG00007899 N 0.885
SS1G_13466 Sclerotinia sclerotiorum SS1G_13466 N 0.885
estExt_fgenesh1_pm.C_130118 Neurospora tetrasperma estExt_fgenesh1_pm.C_130118 N 0.846
estExt_fgenesh1_pg.C_70448 Myceliophthora thermophila estExt_fgenesh1_pg.C_70448 N 0.846
estExt_Genewise1Plus.C_31385 Mycosphaerella fijiensis estExt_Genewise1Plus.C_31385 N 0.846
estExt_Genewise1.C_60471 Cochliobolus heterostrophus C5 estExt_Genewise1.C_60471 N 0.846
estExt_Genewise1.C_210247 Trichoderma reesei estExt_Genewise1.C_210247 N 0.846
estExt_Genewise1.C_110154 Neurospora discreta estExt_Genewise1.C_110154 N 0.846
estExt_fgenesh1_pg.C_40101 Trichoderma atroviride estExt_fgenesh1_pg.C_40101 N 0.846
AB07703.1 Alternaria brassicicola AB07703.1 N 0.846
estExt_fgenesh2_kg.C_60126 Thielavia terrestris estExt_fgenesh2_kg.C_60126 N 0.846
NCU01795 Neurospora crassa NCU01795 N 0.846
gw1.23.236.1 Trichoderma virens gw1.23.236.1 N 0.846
ATEG_06133 Aspergillus terreus CADATEAG00002525 N 0.808
ZC3H15 Anolis carolinensis ENSACAG00000001916 N 0.808
An14g05330 Aspergillus niger CADANGAG00011470 N 0.808
zc3h15 Xenopus tropicalis ENSXETG00000013336 N 0.808
estExt_fgenesh1_pm.C_chr_90145 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_90145 N 0.808
e_gw1.19.91.1 Melampsora laricis populina e_gw1.19.91.1 N 0.808
WUBG_13399 Wuchereria bancrofti WUBG_13399 N 0.808
estExt_Genewise1.C_22051 Cryphonectria parasitica estExt_Genewise1.C_22051 N 0.808
CHGG_07887 Chaetomium globosum CHGG_07887 N 0.808
MGG_07010 Magnaporthe oryzae MGG_07010 N 0.808
Pa_3_8730 Podospora anserina Pa_3_8730 N 0.808
Bm1_13920 Brugia malayi Bm1_13920 N 0.808
estExt_Genewise1Plus.C_sca_12_chr5_2_00446 Nectria haematococca estExt_Genewise1Plus.C_sca_12_chr5_2_00446 N 0.808
LOAG_00784 Loa loa LOAG_00784 N 0.808
fgenesh1_pg.00710_#_148 Aspergillus carbonarius fgenesh1_pg.00710_#_148 N 0.808
Pc21g03130 Penicillium chrysogenum Pc21g03130 N 0.808
ZC3H15 Pteropus vampyrus ENSPVAG00000004828 N 0.769
ZC3H15 Sus scrofa ENSSSCG00000016026 N 0.769
ZC3H15 Sorex araneus ENSSARG00000012071 N 0.769
Zc3h15 Rattus norvegicus ENSRNOG00000005256 N 0.769
ENSPPYG00000013004 Pongo pygmaeus ENSPPYG00000013004 N 0.769
ENSOCUG00000011903 Oryctolagus cuniculus ENSOCUG00000011903 N 0.769
ZC3H15 Ornithorhynchus anatinus ENSOANG00000015742 N 0.769
Zc3h15 Mus musculus ENSMUSG00000027091 N 0.769
ZC3H15 Otolemur garnettii ENSOGAG00000002182 N 0.769
ENSOPRG00000015790 Ochotona princeps ENSOPRG00000015790 N 0.769
ZC3H15 Spermophilus tridecemlineatus ENSSTOG00000006873 N 0.769
ZC3H15 Procavia capensis ENSPCAG00000008499 N 0.769
ZC3H15 Pan troglodytes ENSPTRG00000012717 N 0.769
ZC3H15 Vicugna pacos ENSVPAG00000006980 N 0.769
ITGAV Monodelphis domestica ENSMODG00000010653 N 0.769
GK21573 Drosophila willistoni FBgn0223565 N 0.769
Aqu1.222312 Amphimedon queenslandica Aqu1.222312 N 0.769
gw1.1.348.1 Phycomyces blakesleeanus gw1.1.348.1 N 0.769
estExt_gwp.C_6160004 Branchiostoma floridae estExt_gwp.C_6160004 N 0.769
GD10149 Drosophila simulans FBgn0181924 N 0.769
Ame_R017931 Ailuropoda melanoleuca Ame_R017931 N 0.769
ZC3H15 Tetraodon nigroviridis ENSTNIG00000009860 N 0.769
ZC3H15 Taeniopygia guttata ENSTGUG00000011131 N 0.769
ZC3H15 Tarsius syrichta ENSTSYG00000011019 N 0.769
ZC3H15 Tursiops truncatus ENSTTRG00000012425 N 0.769
e_gw1.8.939.1 Pleurotus ostreatus e_gw1.8.939.1 N 0.769
ZC3H15 Tupaia belangeri ENSTBEG00000015530 N 0.769
ZC3H15 Macaca mulatta ENSMMUG00000017248 N 0.769
UREG_04706 Uncinocarpus reesii UREG_04706 N 0.769
TRV_03417 Trichophyton verrucosum TRV_03417 N 0.769
TESG_03135 Trichophyton tonsurans TESG_03135 N 0.769
TERG_01412 Trichophyton rubrum TERG_01412 N 0.769
VDAG_08863 Verticillium dahliae VDAG_08863 N 0.769
amel4_ncbi_hmm11607 Apis mellifera amel4_ncbi_hmm11607 N 0.769
ZC3HF_BOVIN Bos taurus ENSBTAG00000021762 N 0.769
ACLA_016930 Aspergillus clavatus CADACLAG00000891 N 0.769
nasonia_NCBI_hmm1144383 Nasonia vitripennis nasonia_NCBI_hmm1144383 N 0.769
TEQG_08385 Trichophyton equinum TEQG_08385 N 0.769
PGTG_08922 Puccinia graminis PGTG_08922 N 0.769
ARB_01723 Arthroderma benhamiae ARB_01723 N 0.769
Q6DD06 Xenopus laevis Q6DD06 N 0.769
BAD89267 Xenopus laevis BAD89267 N 0.769
AAH77826 Xenopus laevis AAH77826 N 0.769
CIMG_09790 Coccidioides immitis CIMG_09790 N 0.769
CPSG_09723 Coccidioides posadasii CPSG_09723 N 0.769
PABG_07629 Paracoccidioides brasiliensis PABG_07629 N 0.769
MGYG_00125 Microsporum gypseum MGYG_00125 N 0.769
MCYG_02954 Microsporum canis MCYG_02954 N 0.769
ZC3H15 Canis familiaris ENSCAFG00000014494 N 0.769
VDBG_05241 Verticillium albo atrum VDBG_05241 N 0.769
ENSLAFG00000001563 Loxodonta africana ENSLAFG00000001563 N 0.769
LOC100068634 Equus caballus ENSECAG00000017149 N 0.769
ZC3H15 Felis catus ENSFCAG00000008213 N 0.769
ZC3H15 Homo sapiens ENSG00000065548 N 0.769
ZC3HF_CHICK Gallus gallus ENSGALG00000002670 N 0.769
ZC3H15 Choloepus hoffmanni ENSCHOG00000011958 N 0.769
ZC3H15 Gorilla gorilla ENSGGOG00000000073 N 0.769
Zc3h15 Dipodomys ordii ENSDORG00000011664 N 0.769
ZC3H15 Callithrix jacchus ENSCJAG00000005931 N 0.769
ZC3H15 Myotis lucifugus ENSMLUG00000007741 N 0.769
ENSCPOG00000012965 Cavia porcellus ENSCPOG00000012965 N 0.769
ZC3H15 Microcebus murinus ENSMICG00000014245 N 0.769
ZC3H15 Meleagris gallopavo ENSMGAG00000004447 N 0.769
CAGL0J08679g Candida glabrata CAGL0J08679g N 0.731
gwh2.4.391.1 Phanerochaete chrysosporium gwh2.4.391.1 N 0.731
CNBG_3113 Cryptococcus neoformans CNBG_3113 N 0.731
ENSOCUG00000011909 Oryctolagus cuniculus ENSOCUG00000011909 N 0.731
Scas_Contig578.9 Saccharomyces castellii Scas_Contig578.9 N 0.731
BDBG_01641 Blastomyces dermatitidis BDBG_01641 N 0.731
BGIBMGA011604 Bombyx mori BGIBMGA011604 N 0.731
CC1G_07829 Coprinopsis cinerea CC1G_07829 N 0.731
Minc08580 Meloidogyne incognita Minc08580 N 0.731
ZC3H15 Gasterosteus aculeatus ENSGACG00000011648 N 0.731
XP_002158150.1 Hydra magnipapillata XP_002158150.1 N 0.731
ZC3H15 Dasypus novemcinctus ENSDNOG00000018840 N 0.731
PHUM521160 Pediculus humanus PHUM521160 N 0.731
zc3h15 Danio rerio ENSDARG00000015889 N 0.731
ZC3H15 Takifugu rubripes ENSTRUG00000004988 N 0.731
DGIL_AUG5s16g7t1 Acyrtosiphon pisum DGIL_AUG5s16g7t1 N 0.731
e_gw1.2.668.1 Sporobolomyces roseus e_gw1.2.668.1 N 0.731
RGD1564243 Rattus norvegicus ENSRNOG00000015276 N 0.731
ZC3H15 Oryzias latipes ENSORLG00000018606 N 0.731
estExt_Genewise1Plus.C_sca_2280007 Lottia gigantea estExt_Genewise1Plus.C_sca_2280007 N 0.731
estExt_Genewise1.C_30385 Mucor circinelloides estExt_Genewise1.C_30385 N 0.731
PTTG_08784 Puccinia triticina PTTG_08784 N 0.731
ENSETEG00000015556 Echinops telfairi ENSETEG00000015556 N 0.731
HCAG_08348 Histoplasma capsulatum HCAG_08348 N 0.731