fgenesh2_pm.scaffold_144000004 (Branchiostoma floridae)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 fgenesh2_pm.scaffold_144000004 T05326_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pm.scaffold_144000004 CCCH ZF 195 221

Links

Other CCCH ZF family RBPs
Other Branchiostoma floridae RBPs

237 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
NCU08518 Neurospora crassa NCU08518 N 0.000
estExt_Genewise1.C_170171 Neurospora tetrasperma estExt_Genewise1.C_170171 N 0.000
estExt_Genewise1Plus.C_100354 Neurospora discreta estExt_Genewise1Plus.C_100354 N 0.000
estExt_Genewise1Plus.C_61440 Thielavia terrestris estExt_Genewise1Plus.C_61440 N 0.000
gw1.7.2291.1 Myceliophthora thermophila gw1.7.2291.1 N 0.000
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.000
Pa_3_7140 Podospora anserina Pa_3_7140 N 0.000