estExt_Genewise1.C_31474 (Agaricus bisporus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 estExt_Genewise1.C_31474 T06102_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_31474 CCCH ZF 93 118
estExt_Genewise1.C_31474 CCCH ZF 179 199

Links

Other CCCH ZF family RBPs
Other Agaricus bisporus RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PTRG_00525 Pyrenophora tritici repentis PTRG_00525 N 0.766
e_gwh1.21.47.1 Laccaria bicolor e_gwh1.21.47.1 N 0.915
estExt_fgenesh1_pg.C_120215 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_120215 N 0.766
estExt_fgenesh1_pm.C_120035 Schizophyllum commune estExt_fgenesh1_pm.C_120035 N 0.809
estExt_Genewise1.C_350015 Capitella teleta estExt_Genewise1.C_350015 N 0.766
mgf000781m Mimulus guttatus mgf000781m N 0.702
EAT85557.1 Phaeosphaeria nodorum EAT85557.1 N 0.729
Sjc_0049010 Schistosoma japonicum Sjc_0049010 N 0.745
EEB90926.1 Moniliophthora perniciosa EEB90926.1 N 0.851
estExt_fgenesh2_pm.C_110045 Heterobasidion annosum estExt_fgenesh2_pm.C_110045 N 0.787
fgenesh2_kg.7_#_69_#_840_2_CFPN Serpula lacrymans fgenesh2_kg.7_#_69_#_840_2_CFPN N 0.915
Smp_099900 Schistosoma mansoni Smp_099900 N 0.723
XP_001191490.1 Strongylocentrotus purpuratus XP_001191490.1 N 0.702
e_gw1.132.32.1 Postia placenta e_gw1.132.32.1 N 0.830
GE22859 Drosophila yakuba FBgn0240063 N 0.702
RO3G_08915 Rhizopus oryzae RO3G_08915 N 0.750
SNOG_06906 Stagonospora nodorum SNOG_06906 N 0.729
AGAP008634 Anopheles gambiae AGAP008634 N 0.702
CG8635 Drosophila melanogaster FBgn0033317 N 0.702
GA21225-RA Drosophila pseudoobscura FBgn0081213 N 0.702
GF12572 Drosophila ananassae FBgn0089609 N 0.702
GG10627 Drosophila erecta FBgn0102935 N 0.702
GH21804 Drosophila grimshawi FBgn0129265 N 0.702
GI20775 Drosophila mojavensis FBgn0143510 N 0.702
GL11672 Drosophila persimilis FBgn0149281 N 0.702
GM20672 Drosophila sechellia FBgn0175554 N 0.702
GJ20510 Drosophila virilis FBgn0207650 N 0.702
XP_785608.2 Strongylocentrotus purpuratus XP_785608.2 N 0.702