Aqu1.209597 (Amphimedon queenslandica)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Aqu1.209597 T13270_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.209597 CCHC ZF 234 251

Links

Other CCHC ZF family RBPs
Other Amphimedon queenslandica RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
nasonia_NCBI_hmm136934 Nasonia vitripennis nasonia_NCBI_hmm136934 N 0.722
Aqu1.229739 Amphimedon queenslandica Aqu1.229739 N 0.833
Aqu1.226881 Amphimedon queenslandica Aqu1.226881 N 0.833
Aqu1.211578 Amphimedon queenslandica Aqu1.211578 N 0.833
Aqu1.209265 Amphimedon queenslandica Aqu1.209265 N 0.778
Aqu1.205906 Amphimedon queenslandica Aqu1.205906 N 0.833
Aqu1.205162 Amphimedon queenslandica Aqu1.205162 N 0.833
Aqu1.202218 Amphimedon queenslandica Aqu1.202218 N 0.833
Aqu1.200899 Amphimedon queenslandica Aqu1.200899 N 0.833
nasonia_NCBI_hmm96174 Nasonia vitripennis nasonia_NCBI_hmm96174 N 0.722
nasonia_NCBI_hmm266134 Nasonia vitripennis nasonia_NCBI_hmm266134 N 0.722
nasonia_NCBI_hmm264134 Nasonia vitripennis nasonia_NCBI_hmm264134 N 0.722
fgenesh1_pg.C_scaffold_175000012 Daphnia pulex fgenesh1_pg.C_scaffold_175000012 N 0.722