CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
Minc14969
(
Meloidogyne incognita
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Minc14969
T16150_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc14969
CCHC ZF
233
250
ITCYSCRKQGHIARYCPE
Links
Other
CCHC ZF
family RBPs
Other
Meloidogyne incognita
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CNBG_1048
Cryptococcus neoformans
CNBG_1048
N
0.000
SPPG_08806
Spizellomyces punctatus
SPPG_08806
N
0.000
SPPG_08807
Spizellomyces punctatus
SPPG_08807
N
0.000
ENSDNOG00000002674
Dasypus novemcinctus
ENSDNOG00000002674
N
0.000
LOC_Os07g31590
Oryza sativa
LOC_Os07g31590
N
0.000
GRMZM2G069218
Zea mays
GRMZM2G069218
N
0.000
Medtr1g103590
Medicago truncatula
Medtr1g103590
N
0.000