CNBG_1048 (Cryptococcus neoformans)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 CNBG_1048 T07939_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CNBG_1048T0 CCHC ZF 879 896

Links

Other CCHC ZF family RBPs
Other Cryptococcus neoformans RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT1G54930 Arabidopsis thaliana AT1G54930-TAIR-G N 0.778
XM_002894567.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003658 N 0.778
63792 Aureococcus anophagefferens 63792 N 0.722
estExt_fgenesh4_pg.C_270089 Volvox carteri estExt_fgenesh4_pg.C_270089 N 0.722
fgeneshEH_pg.19__19 Emiliania huxleyi fgeneshEH_pg.19__19 N 0.722
Medtr1g103590 Medicago truncatula Medtr1g103590 N 0.722
LOC_Os12g39190 Oryza sativa LOC_Os12g39190 N 0.722
LOC_Os08g39174 Oryza sativa LOC_Os08g39174 N 0.722
LOC_Os03g20690 Oryza sativa LOC_Os03g20690 N 0.722
LOC_Os04g04120 Oryza sativa LOC_Os04g04120 N 0.722
LOC_Os04g06220 Oryza sativa LOC_Os04g06220 N 0.722
LOC_Os05g49600 Oryza sativa LOC_Os05g49600 N 0.722
LOC_Os12g25080 Oryza sativa LOC_Os12g25080 N 0.722