Smp_039640 (Schistosoma mansoni)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Smp_039640 T16313_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Smp_039640.1 CCHC ZF 147 163
Smp_039640.2 CCHC ZF 159 175

Links

Other CCHC ZF family RBPs
Other Schistosoma mansoni RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PITG_04956 Phytophthora infestans PITG_04956 N 0.706
RO3G_03632 Rhizopus oryzae RO3G_03632 N 0.706
amel4_ncbi_hmm4691 Apis mellifera amel4_ncbi_hmm4691 N 0.706
DGIL_AUG5s1501g15p2t1 Acyrtosiphon pisum DGIL_AUG5s1501g15p2t1 N 0.706
nasonia_NCBI_hmm348274 Nasonia vitripennis nasonia_NCBI_hmm348274 N 0.765
estExt_fgeneshMC_pg.C_40705 Mucor circinelloides estExt_fgeneshMC_pg.C_40705 N 0.706
fgenesh1_pg.C_scaffold_4000063 Phytophthora ramorum fgenesh1_pg.C_scaffold_4000063 N 0.706
Sjc_0084270 Schistosoma japonicum Sjc_0084270 N 0.941