CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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estExt_fgeneshMC_pg.C_40705
(
Mucor circinelloides
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
estExt_fgeneshMC_pg.C_40705
T13654_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshMC_pg.C_40705
CCHC ZF
118
134
VCFKCSQPGHWIYYCPN
Links
Other
CCHC ZF
family RBPs
Other
Mucor circinelloides
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RO3G_03632
Rhizopus oryzae
RO3G_03632
N
0.941
fgeneshPB_pg.2__433
Phycomyces blakesleeanus
fgeneshPB_pg.2__433
N
0.824
estExt_fgenesh1_pg.C_90130
Micromonas pusilla
estExt_fgenesh1_pg.C_90130
N
0.706
Smp_039640
Schistosoma mansoni
Smp_039640
N
0.706