C30B5.4 (Caenorhabditis elegans)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 C30B5.4 T33338_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
C30B5.4 RRM 40 110

Links

Other RRM family RBPs
Other Caenorhabditis elegans RBPs

55 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XP_002164481.1 Hydra magnipapillata XP_002164481.1 N 0.761
RBMX2 Tarsius syrichta ENSTSYG00000010611 N 0.718
RBMX2 Takifugu rubripes ENSTRUG00000001699 N 0.746
RBMX2 Tetraodon nigroviridis ENSTNIG00000007672 N 0.732
RBMX2 Spermophilus tridecemlineatus ENSSTOG00000015391 N 0.722
RBMX2 Sorex araneus ENSSARG00000007350 N 0.732
Rbmx2 Rattus norvegicus ENSRNOG00000007371 N 0.708
RBMX2 Pteropus vampyrus ENSPVAG00000004425 N 0.722
RBMX2 Procavia capensis ENSPCAG00000012903 N 0.708
ENSOGAG00000006237 Otolemur garnettii ENSOGAG00000006237 N 0.722
RBMX2 Oryctolagus cuniculus ENSOCUG00000011809 N 0.740
Rbmx2 Mus musculus ENSMUSG00000031107 N 0.708
RBMX2 Tursiops truncatus ENSTTRG00000016210 N 0.722
GI11259 Drosophila mojavensis FBgn0134020 N 0.704
GI11260 Drosophila mojavensis FBgn0134021 N 0.704
Ame_R006638 Ailuropoda melanoleuca Ame_R006638 N 0.722
gw1.462.53.1 Capitella teleta gw1.462.53.1 N 0.718
gw1.1.2244.1 Trichoplax adhaerens gw1.1.2244.1 N 0.704
fgenesh2_pg.C_sca_10000115 Lottia gigantea fgenesh2_pg.C_sca_10000115 N 0.718
estExt_Genewise1Plus.C_110324 Daphnia pulex estExt_Genewise1Plus.C_110324 N 0.732
estExt_fgenesh1_pg.C_410012 Monosiga brevicollis estExt_fgenesh1_pg.C_410012 N 0.732
estExt_fgenesh1_pg.C_30395 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_30395 N 0.704
Aqu1.228439 Amphimedon queenslandica Aqu1.228439 N 0.746
Aqu1.200557 Amphimedon queenslandica Aqu1.200557 N 0.732
145168 Helobdella robusta 145168 N 0.732
GI20215 Drosophila mojavensis FBgn0142951 N 0.704
ENSMODG00000019800 Monodelphis domestica ENSMODG00000019800 N 0.708
XM_001377711.1 Monodelphis domestica ENSMODG00000012002 N 0.708
XP_001110036.1 Macaca mulatta ENSMMUG00000020845 N 0.722
RBMX2 Cavia porcellus ENSCPOG00000006640 N 0.736
LOC100388331 Callithrix jacchus ENSCJAG00000002436 N 0.722
RBMX2 Canis familiaris ENSCAFG00000018770 N 0.703
CRE26315 Caenorhabditis remanei CRE26315 N 0.958
CJA10629 Caenorhabditis japonica CJA10629 N 0.915
CBN24057 Caenorhabditis brenneri CBN24057 N 0.958
CBG02589 Caenorhabditis briggsae CBG02589 N 0.972
nasonia_NCBI_hmm382923 Nasonia vitripennis nasonia_NCBI_hmm382923 N 0.761
WUBG_13107 Wuchereria bancrofti WUBG_13107 N 0.817
SPRG_07125 Saprolegnia parasitica SPRG_07125 N 0.704
LOAG_03303 Loa loa LOAG_03303 N 0.730
ENSCSAVG00000001047 Ciona savignyi ENSCSAVG00000001047 N 0.732
rbmx2 Danio rerio ENSDARG00000044380 N 0.732
LOC100058600 Equus caballus ENSECAG00000008257 N 0.722
RBMX2 Macaca mulatta ENSMMUG00000008389 N 0.722
ENSMLUG00000017095 Myotis lucifugus ENSMLUG00000017095 N 0.732
ENSMLUG00000010298 Myotis lucifugus ENSMLUG00000010298 N 0.722
RBMX2 Microcebus murinus ENSMICG00000015139 N 0.722
RBMX2 Meleagris gallopavo ENSMGAG00000001801 N 0.722
RBMX2 Macropus eugenii ENSMEUG00000010913 N 0.722
RBMX2 Gorilla gorilla ENSGGOG00000023687 N 0.722
ENSGGOG00000016146 Gorilla gorilla ENSGGOG00000016146 N 0.708
RBMX2 Gallus gallus ENSGALG00000004025 N 0.736
RBMX2 Homo sapiens ENSG00000134597 N 0.722
RBMX2 Echinops telfairi ENSETEG00000001763 N 0.750
Bm1_02690 Brugia malayi Bm1_02690 N 0.817