CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBMX2
(
Gallus gallus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGALG00000004025
T37628_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGALP00000006398
RRM
38
108
VFIGGLPYQLTEGDVICVFSQYGEVVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIR
Links
Other
RRM
family RBPs
Other
Gallus gallus
RBPs
94 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBMX2
Meleagris gallopavo
ENSMGAG00000001801
N
0.958
RBMX2
Echinops telfairi
ENSETEG00000001763
N
0.944
RBMX2
Spermophilus tridecemlineatus
ENSSTOG00000015391
N
0.944
Rbmx2
Mus musculus
ENSMUSG00000031107
N
0.930
RBMX2
Cavia porcellus
ENSCPOG00000006640
N
0.930
Rbmx2
Rattus norvegicus
ENSRNOG00000007371
N
0.930
RBMX2
Loxodonta africana
ENSLAFG00000017625
N
0.919
RBMX2
Oryctolagus cuniculus
ENSOCUG00000011809
N
0.918
LOC100058600
Equus caballus
ENSECAG00000008257
N
0.915
RBMX2
Anolis carolinensis
ENSACAG00000008819
N
0.915
RBMX2
Tursiops truncatus
ENSTTRG00000016210
N
0.915
Ame_R006638
Ailuropoda melanoleuca
Ame_R006638
N
0.915
RBMX2
Pteropus vampyrus
ENSPVAG00000004425
N
0.915
ENSOGAG00000006237
Otolemur garnettii
ENSOGAG00000006237
N
0.915
XM_001377711.1
Monodelphis domestica
ENSMODG00000012002
N
0.915
ENSMLUG00000010298
Myotis lucifugus
ENSMLUG00000010298
N
0.915
RBMX2
Microcebus murinus
ENSMICG00000015139
N
0.915
RBMX2
Homo sapiens
ENSG00000134597
N
0.915
LOC100388331
Callithrix jacchus
ENSCJAG00000002436
N
0.915
RBMX2
Gorilla gorilla
ENSGGOG00000023687
N
0.915
RBMX2
Macaca mulatta
ENSMMUG00000008389
N
0.915
RBMX2
Macropus eugenii
ENSMEUG00000010913
N
0.901
ENSGGOG00000016146
Gorilla gorilla
ENSGGOG00000016146
N
0.901
RBMX2
Erinaceus europaeus
ENSEEUG00000000839
N
0.901
RBMX2
Procavia capensis
ENSPCAG00000012903
N
0.901
ENSMODG00000019800
Monodelphis domestica
ENSMODG00000019800
N
0.901
XP_001110036.1
Macaca mulatta
ENSMMUG00000020845
N
0.901
RBMX2
Takifugu rubripes
ENSTRUG00000001699
N
0.889
rbmx2
Danio rerio
ENSDARG00000044380
N
0.889
XR_023755.1
Pan troglodytes
ENSPTRG00000022269
N
0.887
ENSPPYG00000020717
Pongo pygmaeus
ENSPPYG00000020717
N
0.887
RBMX2
Canis familiaris
ENSCAFG00000018770
N
0.878
ENSMLUG00000017095
Myotis lucifugus
ENSMLUG00000017095
N
0.875
RBMX2
Tetraodon nigroviridis
ENSTNIG00000007672
N
0.875
ENSOGAG00000009060
Otolemur garnettii
ENSOGAG00000009060
N
0.873
ENSGGOG00000026106
Gorilla gorilla
ENSGGOG00000026106
N
0.873
RBMX2
Sorex araneus
ENSSARG00000007350
N
0.861
LOC534630
Bos taurus
ENSBTAG00000006252
N
0.861
RBMX2
Ornithorhynchus anatinus
ENSOANG00000001362
N
0.851
ENSLAFG00000028277
Loxodonta africana
ENSLAFG00000028277
N
0.847
RBMX2
Oryzias latipes
ENSORLG00000013183
N
0.833
RBMX2
Gasterosteus aculeatus
ENSGACG00000001855
N
0.833
RBMX2
Taeniopygia guttata
ENSTGUG00000005239
N
0.831
GI20215
Drosophila mojavensis
FBgn0142951
N
0.819
XP_002164481.1
Hydra magnipapillata
XP_002164481.1
N
0.819
estExt_fgenesh2_pg.C_1800064
Branchiostoma floridae
estExt_fgenesh2_pg.C_1800064
N
0.819
GF14433
Drosophila ananassae
FBgn0091460
N
0.819
nasonia_NCBI_hmm382923
Nasonia vitripennis
nasonia_NCBI_hmm382923
N
0.819
LOC613705
Bos taurus
ENSBTAG00000014771
N
0.819
GK14925
Drosophila willistoni
FBgn0216930
N
0.819
GI11260
Drosophila mojavensis
FBgn0134021
N
0.819
GI11259
Drosophila mojavensis
FBgn0134020
N
0.819
gw1.462.53.1
Capitella teleta
gw1.462.53.1
N
0.806
fgenesh2_pg.C_sca_10000115
Lottia gigantea
fgenesh2_pg.C_sca_10000115
N
0.806
XP_001180915.1
Strongylocentrotus purpuratus
XP_001180915.1
N
0.806
XP_791635.2
Strongylocentrotus purpuratus
XP_791635.2
N
0.806
GJ13600
Drosophila virilis
FBgn0200822
N
0.806
PHUM617480
Pediculus humanus
PHUM617480
N
0.806
GL26176
Drosophila persimilis
FBgn0163758
N
0.806
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.806
Aqu1.200557
Amphimedon queenslandica
Aqu1.200557
N
0.806
GA10331-RA
Drosophila pseudoobscura
FBgn0070389
N
0.806
RBMX2
Tarsius syrichta
ENSTSYG00000010611
N
0.806
ENSMMUG00000001001
Macaca mulatta
ENSMMUG00000001001
N
0.803
GD24233
Drosophila simulans
FBgn0195582
N
0.792
GE13281
Drosophila yakuba
FBgn0230967
N
0.792
estExt_Genewise1Plus.C_110324
Daphnia pulex
estExt_Genewise1Plus.C_110324
N
0.792
GH13830
Drosophila grimshawi
FBgn0121306
N
0.792
CG10466
Drosophila melanogaster
FBgn0032822
N
0.792
GG21207
Drosophila erecta
FBgn0113387
N
0.792
GM17378
Drosophila sechellia
FBgn0172288
N
0.792
AGAP000977
Anopheles gambiae
AGAP000977
N
0.778
gw1.1.2244.1
Trichoplax adhaerens
gw1.1.2244.1
N
0.778
gw.130.169.1
Nematostella vectensis
gw.130.169.1
N
0.778
ENSOCUG00000020937
Oryctolagus cuniculus
ENSOCUG00000020937
N
0.773
estExt_fgenesh1_pg.C_30395
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_30395
N
0.764
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.764
CRE26315
Caenorhabditis remanei
CRE26315
N
0.764
AAH56844
Xenopus laevis
AAH56844
N
0.760
gw1.1.3012.1
Tremella mesenterica
gw1.1.3012.1
N
0.750
Bm1_02690
Brugia malayi
Bm1_02690
N
0.750
CBG02589
Caenorhabditis briggsae
CBG02589
N
0.750
WUBG_13107
Wuchereria bancrofti
WUBG_13107
N
0.750
ENSCSAVG00000001047
Ciona savignyi
ENSCSAVG00000001047
N
0.750
AAEL002461
Aedes aegypti
AAEL002461
N
0.750
estExt_fgenesh1_pg.C_410012
Monosiga brevicollis
estExt_fgenesh1_pg.C_410012
N
0.736
ENSMODG00000011981
Monodelphis domestica
ENSMODG00000011981
N
0.736
145168
Helobdella robusta
145168
N
0.736
CAOG_00327
Capsaspora owczarzaki
CAOG_00327
N
0.736
C30B5.4
Caenorhabditis elegans
C30B5.4
N
0.736
CBN24057
Caenorhabditis brenneri
CBN24057
N
0.736
Sjc_0109550
Schistosoma japonicum
Sjc_0109550
N
0.720
Smp_170230
Schistosoma mansoni
Smp_170230
N
0.720
CJA10629
Caenorhabditis japonica
CJA10629
N
0.708