CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBMX2
(
Sorex araneus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSSARG00000007350
T41321_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000006655
RRM
37
107
IFLGGLPYELTEGDVICDFFQYGEIVNINLVRDKKTGKSKGFGFLCYEDQRSTILAVDNFNGIKIKGRTIR
Links
Other
RRM
family RBPs
Other
Sorex araneus
RBPs
105 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBMX2
Cavia porcellus
ENSCPOG00000006640
N
0.931
ENSMLUG00000017095
Myotis lucifugus
ENSMLUG00000017095
N
0.930
Ame_R006638
Ailuropoda melanoleuca
Ame_R006638
N
0.917
RBMX2
Microcebus murinus
ENSMICG00000015139
N
0.917
RBMX2
Macaca mulatta
ENSMMUG00000008389
N
0.917
RBMX2
Gorilla gorilla
ENSGGOG00000023687
N
0.917
RBMX2
Echinops telfairi
ENSETEG00000001763
N
0.917
LOC100388331
Callithrix jacchus
ENSCJAG00000002436
N
0.917
RBMX2
Spermophilus tridecemlineatus
ENSSTOG00000015391
N
0.917
LOC100058600
Equus caballus
ENSECAG00000008257
N
0.917
ENSOGAG00000006237
Otolemur garnettii
ENSOGAG00000006237
N
0.917
RBMX2
Homo sapiens
ENSG00000134597
N
0.917
ENSMLUG00000010298
Myotis lucifugus
ENSMLUG00000010298
N
0.917
RBMX2
Tursiops truncatus
ENSTTRG00000016210
N
0.917
RBMX2
Pteropus vampyrus
ENSPVAG00000004425
N
0.917
RBMX2
Oryctolagus cuniculus
ENSOCUG00000011809
N
0.904
XP_001110036.1
Macaca mulatta
ENSMMUG00000020845
N
0.903
ENSGGOG00000016146
Gorilla gorilla
ENSGGOG00000016146
N
0.903
Rbmx2
Rattus norvegicus
ENSRNOG00000007371
N
0.903
RBMX2
Macropus eugenii
ENSMEUG00000010913
N
0.903
RBMX2
Canis familiaris
ENSCAFG00000018770
N
0.892
Rbmx2
Mus musculus
ENSMUSG00000031107
N
0.889
ENSMODG00000019800
Monodelphis domestica
ENSMODG00000019800
N
0.889
rbmx2
Danio rerio
ENSDARG00000044380
N
0.887
RBMX2
Takifugu rubripes
ENSTRUG00000001699
N
0.887
RBMX2
Ornithorhynchus anatinus
ENSOANG00000001362
N
0.878
ENSGGOG00000026106
Gorilla gorilla
ENSGGOG00000026106
N
0.875
XM_001377711.1
Monodelphis domestica
ENSMODG00000012002
N
0.875
RBMX2
Anolis carolinensis
ENSACAG00000008819
N
0.875
RBMX2
Tetraodon nigroviridis
ENSTNIG00000007672
N
0.873
ENSLAFG00000028277
Loxodonta africana
ENSLAFG00000028277
N
0.873
RBMX2
Oryzias latipes
ENSORLG00000013183
N
0.873
XR_023755.1
Pan troglodytes
ENSPTRG00000022269
N
0.861
ENSPPYG00000020717
Pongo pygmaeus
ENSPPYG00000020717
N
0.861
RBMX2
Gallus gallus
ENSGALG00000004025
N
0.861
nasonia_NCBI_hmm382923
Nasonia vitripennis
nasonia_NCBI_hmm382923
N
0.859
XP_002164481.1
Hydra magnipapillata
XP_002164481.1
N
0.859
LOC534630
Bos taurus
ENSBTAG00000006252
N
0.859
LOC613705
Bos taurus
ENSBTAG00000014771
N
0.859
RBMX2
Loxodonta africana
ENSLAFG00000017625
N
0.851
RBMX2
Meleagris gallopavo
ENSMGAG00000001801
N
0.847
ENSOGAG00000009060
Otolemur garnettii
ENSOGAG00000009060
N
0.847
RBMX2
Erinaceus europaeus
ENSEEUG00000000839
N
0.847
RBMX2
Procavia capensis
ENSPCAG00000012903
N
0.847
RBMX2
Gasterosteus aculeatus
ENSGACG00000001855
N
0.845
RBMX2
Tarsius syrichta
ENSTSYG00000010611
N
0.831
XP_791635.2
Strongylocentrotus purpuratus
XP_791635.2
N
0.831
XP_001180915.1
Strongylocentrotus purpuratus
XP_001180915.1
N
0.831
Aqu1.200557
Amphimedon queenslandica
Aqu1.200557
N
0.817
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.817
estExt_fgenesh2_pg.C_1800064
Branchiostoma floridae
estExt_fgenesh2_pg.C_1800064
N
0.817
ENSMMUG00000001001
Macaca mulatta
ENSMMUG00000001001
N
0.806
ENSCSAVG00000001047
Ciona savignyi
ENSCSAVG00000001047
N
0.803
estExt_Genewise1Plus.C_110324
Daphnia pulex
estExt_Genewise1Plus.C_110324
N
0.803
gw1.462.53.1
Capitella teleta
gw1.462.53.1
N
0.803
fgenesh2_pg.C_sca_10000115
Lottia gigantea
fgenesh2_pg.C_sca_10000115
N
0.789
GF14433
Drosophila ananassae
FBgn0091460
N
0.789
GJ13600
Drosophila virilis
FBgn0200822
N
0.789
AGAP000977
Anopheles gambiae
AGAP000977
N
0.789
GK14925
Drosophila willistoni
FBgn0216930
N
0.789
ENSOCUG00000020937
Oryctolagus cuniculus
ENSOCUG00000020937
N
0.784
ENSMODG00000011981
Monodelphis domestica
ENSMODG00000011981
N
0.775
WUBG_13107
Wuchereria bancrofti
WUBG_13107
N
0.775
GA10331-RA
Drosophila pseudoobscura
FBgn0070389
N
0.775
GI11259
Drosophila mojavensis
FBgn0134020
N
0.775
PHUM617480
Pediculus humanus
PHUM617480
N
0.775
Bm1_02690
Brugia malayi
Bm1_02690
N
0.775
GI11260
Drosophila mojavensis
FBgn0134021
N
0.775
AAEL002461
Aedes aegypti
AAEL002461
N
0.775
GI20215
Drosophila mojavensis
FBgn0142951
N
0.775
GL26176
Drosophila persimilis
FBgn0163758
N
0.775
RBMX2
Taeniopygia guttata
ENSTGUG00000005239
N
0.764
GH13830
Drosophila grimshawi
FBgn0121306
N
0.761
gw.130.169.1
Nematostella vectensis
gw.130.169.1
N
0.761
GE13281
Drosophila yakuba
FBgn0230967
N
0.761
GM17378
Drosophila sechellia
FBgn0172288
N
0.761
GD24233
Drosophila simulans
FBgn0195582
N
0.761
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.761
CG10466
Drosophila melanogaster
FBgn0032822
N
0.761
GG21207
Drosophila erecta
FBgn0113387
N
0.761
145168
Helobdella robusta
145168
N
0.746
C30B5.4
Caenorhabditis elegans
C30B5.4
N
0.732
estExt_fgenesh1_pg.C_410012
Monosiga brevicollis
estExt_fgenesh1_pg.C_410012
N
0.732
estExt_fgenesh1_pg.C_30395
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_30395
N
0.732
CRE26315
Caenorhabditis remanei
CRE26315
N
0.732
Sjc_0109550
Schistosoma japonicum
Sjc_0109550
N
0.730
Smp_170230
Schistosoma mansoni
Smp_170230
N
0.730
AAH56844
Xenopus laevis
AAH56844
N
0.730
gw1.1.3012.1
Tremella mesenterica
gw1.1.3012.1
N
0.718
CBG02589
Caenorhabditis briggsae
CBG02589
N
0.718
estExt_fgenesh3_pg.C_500008
Postia placenta
estExt_fgenesh3_pg.C_500008
N
0.718
DGIL_AUG5s13597g2t1
Acyrtosiphon pisum
DGIL_AUG5s13597g2t1
N
0.718
e_gw1.98.15.1
Volvox carteri
e_gw1.98.15.1
N
0.718
e_gw1.1.4685.1
Myceliophthora thermophila
e_gw1.1.4685.1
N
0.718
gw1.1.2244.1
Trichoplax adhaerens
gw1.1.2244.1
N
0.718
CAOG_00327
Capsaspora owczarzaki
CAOG_00327
N
0.718
CPIJ015641
Culex quinquefasciatus
CPIJ015641
N
0.716
CpipJ_CPIJ015641
Culex pipiens
CpipJ_CPIJ015641
N
0.716
gw1.1.2440.1
Mucor circinelloides
gw1.1.2440.1
N
0.704
CJA10629
Caenorhabditis japonica
CJA10629
N
0.704
CBN24057
Caenorhabditis brenneri
CBN24057
N
0.704
Pa_1_22200
Podospora anserina
Pa_1_22200
N
0.704
gwh2.2.841.1
Phanerochaete chrysosporium
gwh2.2.841.1
N
0.704
ISCW009356
Ixodes scapularis
ISCW009356
N
0.704
LOAG_03303
Loa loa
LOAG_03303
N
0.703