ENSCJAG00000008291 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000008291 T35549_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPH2
M151_0.6 		Homo sapiens GGGAGGG RNAcompete
Ray et al.(2013)
RNCMPT00160 		0.710
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000015301 RRM 13 83
ENSCJAP00000015301 RRM 113 182
ENSCJAP00000015301 RRM 291 313

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPH2 Homo sapiens ENSG00000126945 D 0.710
ENSOCUG00000006387 Oryctolagus cuniculus ENSOCUG00000006387 I 0.714
ENSOCUG00000010629 Oryctolagus cuniculus ENSOCUG00000010629 I 0.714
HNRNPH2 Ochotona princeps ENSOPRG00000007985 I 0.714
HNRNPH2 Procavia capensis ENSPCAG00000003333 I 0.710
ENSPPYG00000020553 Pongo pygmaeus ENSPPYG00000020553 I 0.710
HNRNPH2 Pan troglodytes ENSPTRG00000022107 I 0.710
Hnrnph2 Rattus norvegicus ENSRNOG00000011661 I 0.705
HNRNPH2 Sorex araneus ENSSARG00000014182 I 0.714
HNRNPH2 Tarsius syrichta ENSTSYG00000007811 I 0.714
Hnrnph2 Mus musculus ENSMUSG00000045427 I 0.705
HNRNPH2 Macaca mulatta ENSMMUG00000019580 I 0.710
ENSMGAG00000007328 Meleagris gallopavo ENSMGAG00000007328 I 0.700
Ame_R018226 Ailuropoda melanoleuca Ame_R018226 I 0.714
HNRNPH2 Callithrix jacchus ENSCJAG00000004908 I 0.710
HNRNPH2 Cavia porcellus ENSCPOG00000012405 I 0.714
LOC100057665 Equus caballus ENSECAG00000023575 I 0.714
HNRNPH2 Echinops telfairi ENSETEG00000008416 I 0.714
HNRNPH1 Echinops telfairi ENSETEG00000011303 I 0.714
Q5F3I8_CHICK Gallus gallus ENSGALG00000005955 I 0.700
HNRNPH2 Gorilla gorilla ENSGGOG00000008096 I 0.710
HNRNPH2 Tursiops truncatus ENSTTRG00000012786 I 0.714
cassava4432.m1 Manihot esculenta cassava4432.m1 N 0.000
PK19527.1 Cannabis sativa PK19527.1 N 0.000
AT5G04810 Arabidopsis thaliana AT5G04810-TAIR-G N 0.000
ppa018727m Prunus persica ppa018727m N 0.000