ELAVL1 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000031727 T35712_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ELAVL1
M327_0.6 		Homo sapiens Sequence logo not available KKNWWDNNNUKNNUUNUNNH RIP-chip
Cook et al.(2011)
714_14981256 		0.767
ELAVL1
M232_0.6 		Homo sapiens UUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00274 		0.767
ELAVL1
M127_0.6 		Homo sapiens UUKRUUU RNAcompete
Ray et al.(2013)
RNCMPT00136 		0.767
ELAVL1
M112_0.6 		Homo sapiens UUURKUU RNAcompete
Ray et al.(2013)
RNCMPT00117 		0.767
ELAVL1
M108_0.6 		Homo sapiens UUWGUUU RNAcompete
Ray et al.(2013)
RNCMPT00112 		0.767
ELAVL1
M031_0.6 		Homo sapiens UUDUUUU RNAcompete
Ray et al.(2013)
RNCMPT00032 		0.767
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000043197 RRM 4 67
ENSCJAP00000043197 RRM 85 153
ENSCJAP00000043197 RRM 222 290

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Genemark.10526_g Serpula lacrymans Genemark.10526_g N 0.000
Genemark.6548_g Serpula lacrymans Genemark.6548_g N 0.000
Genemark.6054_g Serpula lacrymans Genemark.6054_g N 0.000
Genemark.4804_g Serpula lacrymans Genemark.4804_g N 0.000
Genemark.3124_g Serpula lacrymans Genemark.3124_g N 0.000
Genemark.3014_g Serpula lacrymans Genemark.3014_g N 0.000
Genemark.12199_g Serpula lacrymans Genemark.12199_g N 0.000
Genemark.12031_g Serpula lacrymans Genemark.12031_g N 0.000
Genemark.11813_g Serpula lacrymans Genemark.11813_g N 0.000
Genemark.11725_g Serpula lacrymans Genemark.11725_g N 0.000
Genemark.10975_g Serpula lacrymans Genemark.10975_g N 0.000
Genemark.940_g Serpula lacrymans Genemark.940_g N 0.000