U2SURP (Danio rerio)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDARG00000061490 T36200_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000082147 RRM 210 283
ENSDARP00000101861 RRM 198 271

Links

Other RRM family RBPs
Other Danio rerio RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XP_794306.2 Strongylocentrotus purpuratus XP_794306.2 N 0.760
U2SURP Sus scrofa ENSSSCG00000011684 N 0.946
U2SURP Sorex araneus ENSSARG00000013779 N 0.824
RGD1307882 Rattus norvegicus ENSRNOG00000008607 N 0.946
U2SURP Pteropus vampyrus ENSPVAG00000016077 N 0.946
U2SURP Pan troglodytes ENSPTRG00000015489 N 0.946
ENSPPYG00000014178 Pongo pygmaeus ENSPPYG00000014178 N 0.946
U2SURP Procavia capensis ENSPCAG00000015251 N 0.946
U2SURP Oryzias latipes ENSORLG00000010235 N 0.986
U2SURP Otolemur garnettii ENSOGAG00000004335 N 0.824
U2SURP Oryctolagus cuniculus ENSOCUG00000012121 N 0.946
U2SURP Spermophilus tridecemlineatus ENSSTOG00000015997 N 0.813
U2SURP Tupaia belangeri ENSTBEG00000016313 N 0.946
XP_001179024.1 Strongylocentrotus purpuratus XP_001179024.1 N 0.760
Ame_R004744 Ailuropoda melanoleuca Ame_R004744 N 0.946
estExt_Genewise1.C_650028 Daphnia pulex estExt_Genewise1.C_650028 N 0.720
estExt_fgenesh2_pm.C_3790010 Branchiostoma floridae estExt_fgenesh2_pm.C_3790010 N 0.733
sr140 Xenopus tropicalis ENSXETG00000022133 N 0.946
U2SURP Vicugna pacos ENSVPAG00000004697 N 0.946
U2SURP Tursiops truncatus ENSTTRG00000017170 N 0.946
U2SURP Takifugu rubripes ENSTRUG00000017810 N 0.986
U2SURP Tetraodon nigroviridis ENSTNIG00000012767 N 0.986
U2SURP Taeniopygia guttata ENSTGUG00000008687 N 0.946
U2SURP Ornithorhynchus anatinus ENSOANG00000003644 N 0.946
2610101N10Rik Mus musculus ENSMUSG00000032407 N 0.946
XM_001372164.1 Monodelphis domestica ENSMODG00000021242 N 0.946
U2SURP Erinaceus europaeus ENSEEUG00000013553 N 0.946
LOC100051188 Equus caballus ENSECAG00000022460 N 0.946
U2SURP Dasypus novemcinctus ENSDNOG00000006427 N 0.946
zgc:163098 Danio rerio ENSDARG00000078911 N 0.733
U2SURP Cavia porcellus ENSCPOG00000011656 N 0.946
LOC100411013 Callithrix jacchus ENSCJAG00000001639 N 0.946
U2SURP Choloepus hoffmanni ENSCHOG00000001300 N 0.946
U2SURP Canis familiaris ENSCAFG00000007973 N 0.933
Q148C6_BOVIN Bos taurus ENSBTAG00000009154 N 0.946
U2SURP Echinops telfairi ENSETEG00000000149 N 0.946
U2SURP Homo sapiens ENSG00000163714 N 0.946
ENSMODG00000010847 Monodelphis domestica ENSMODG00000010847 N 0.840
U2SURP Macaca mulatta ENSMMUG00000002775 N 0.946
U2SURP Myotis lucifugus ENSMLUG00000002920 N 0.946
U2SURP Microcebus murinus ENSMICG00000008681 N 0.824
U2SURP Meleagris gallopavo ENSMGAG00000006549 N 0.946
U2SURP Macropus eugenii ENSMEUG00000000127 N 0.946
U2SURP Loxodonta africana ENSLAFG00000002566 N 0.946
U2SURP Gorilla gorilla ENSGGOG00000005563 N 0.946
LOC424773 Gallus gallus ENSGALG00000002612 N 0.946
U2SURP Gasterosteus aculeatus ENSGACG00000003763 N 0.973
U2SURP Anolis carolinensis ENSACAG00000009512 N 0.946