U2SURP (Spermophilus tridecemlineatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSTOG00000015997 T41673_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000014318 RRM 275 345

Links

Other RRM family RBPs
Other Spermophilus tridecemlineatus RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC424773 Gallus gallus ENSGALG00000002612 N 0.853
U2SURP Gorilla gorilla ENSGGOG00000005563 N 0.853
U2SURP Loxodonta africana ENSLAFG00000002566 N 0.853
U2SURP Tupaia belangeri ENSTBEG00000016313 N 0.853
U2SURP Homo sapiens ENSG00000163714 N 0.853
U2SURP Erinaceus europaeus ENSEEUG00000013553 N 0.853
U2SURP Echinops telfairi ENSETEG00000000149 N 0.853
U2SURP Macropus eugenii ENSMEUG00000000127 N 0.853
U2SURP Meleagris gallopavo ENSMGAG00000006549 N 0.853
XM_001372164.1 Monodelphis domestica ENSMODG00000021242 N 0.853
2610101N10Rik Mus musculus ENSMUSG00000032407 N 0.853
U2SURP Ornithorhynchus anatinus ENSOANG00000003644 N 0.853
U2SURP Procavia capensis ENSPCAG00000015251 N 0.853
U2SURP Macaca mulatta ENSMMUG00000002775 N 0.853
ENSPPYG00000014178 Pongo pygmaeus ENSPPYG00000014178 N 0.853
U2SURP Myotis lucifugus ENSMLUG00000002920 N 0.853
LOC100051188 Equus caballus ENSECAG00000022460 N 0.853
U2SURP Dasypus novemcinctus ENSDNOG00000006427 N 0.853
U2SURP Vicugna pacos ENSVPAG00000004697 N 0.853
sr140 Xenopus tropicalis ENSXETG00000022133 N 0.853
U2SURP Pteropus vampyrus ENSPVAG00000016077 N 0.853
U2SURP Tursiops truncatus ENSTTRG00000017170 N 0.853
RGD1307882 Rattus norvegicus ENSRNOG00000008607 N 0.853
U2SURP Taeniopygia guttata ENSTGUG00000008687 N 0.853
U2SURP Sus scrofa ENSSSCG00000011684 N 0.853
Ame_R004744 Ailuropoda melanoleuca Ame_R004744 N 0.853
U2SURP Anolis carolinensis ENSACAG00000009512 N 0.853
U2SURP Cavia porcellus ENSCPOG00000011656 N 0.853
U2SURP Pan troglodytes ENSPTRG00000015489 N 0.853
LOC100411013 Callithrix jacchus ENSCJAG00000001639 N 0.853
U2SURP Choloepus hoffmanni ENSCHOG00000001300 N 0.853
Q148C6_BOVIN Bos taurus ENSBTAG00000009154 N 0.853
U2SURP Canis familiaris ENSCAFG00000007973 N 0.853
U2SURP Oryctolagus cuniculus ENSOCUG00000012121 N 0.853
U2SURP Gasterosteus aculeatus ENSGACG00000003763 N 0.840
U2SURP Tetraodon nigroviridis ENSTNIG00000012767 N 0.827
U2SURP Oryzias latipes ENSORLG00000010235 N 0.827
U2SURP Takifugu rubripes ENSTRUG00000017810 N 0.827
U2SURP Danio rerio ENSDARG00000061490 N 0.813
ENSMODG00000010847 Monodelphis domestica ENSMODG00000010847 N 0.787
U2SURP Sorex araneus ENSSARG00000013779 N 0.733
U2SURP Microcebus murinus ENSMICG00000008681 N 0.733
U2SURP Otolemur garnettii ENSOGAG00000004335 N 0.733
estExt_fgenesh2_pm.C_3790010 Branchiostoma floridae estExt_fgenesh2_pm.C_3790010 N 0.707