CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPA3
(
Erinaceus europaeus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSEEUG00000006347
T36782_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000005807
RRM
37
106
LFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVE
ENSEEUP00000005807
RRM
128
150
IFVGGIKEDTEEYNLRDYFEXXX
Links
Other
RRM
family RBPs
Other
Erinaceus europaeus
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
amel4_ncbi_hmm3083
Apis mellifera
amel4_ncbi_hmm3083
N
0.000
GI20563
Drosophila mojavensis
FBgn0143299
N
0.000
GL11428
Drosophila persimilis
FBgn0149037
N
0.000
GL17545
Drosophila persimilis
FBgn0155148
N
0.000
GM15914
Drosophila sechellia
FBgn0170830
N
0.000
GM21780
Drosophila sechellia
FBgn0176658
N
0.000
GD11271
Drosophila simulans
FBgn0183021
N
0.000
GJ19910
Drosophila virilis
FBgn0207052
N
0.000
GJ20374
Drosophila virilis
FBgn0207514
N
0.000
GJ22415
Drosophila virilis
FBgn0209527
N
0.000
GK17902
Drosophila willistoni
FBgn0219901
N
0.000
GK20819
Drosophila willistoni
FBgn0222815
N
0.000
GK22901
Drosophila willistoni
FBgn0224863
N
0.000
GE11667
Drosophila yakuba
FBgn0229463
N
0.000
GE13991
Drosophila yakuba
FBgn0231623
N
0.000
GE14183
Drosophila yakuba
FBgn0231805
N
0.000
GI20561
Drosophila mojavensis
FBgn0143297
N
0.000
GI18580
Drosophila mojavensis
FBgn0141319
N
0.000
DGIL_AUG5s14032g4t1
Acyrtosiphon pisum
DGIL_AUG5s14032g4t1
N
0.000
nasonia_NCBI_hmm272534
Nasonia vitripennis
nasonia_NCBI_hmm272534
N
0.000
AAEL009694
Aedes aegypti
AAEL009694
N
0.000
qkr54B
Drosophila melanogaster
FBgn0022987
N
0.000
CG10384
Drosophila melanogaster
FBgn0034731
N
0.000
GA19155-RA
Drosophila pseudoobscura
FBgn0079152
N
0.000
GF11890
Drosophila ananassae
FBgn0088930
N
0.000
GF11894
Drosophila ananassae
FBgn0088934
N
0.000
GF13124
Drosophila ananassae
FBgn0090157
N
0.000
GG20683
Drosophila erecta
FBgn0112870
N
0.000
GG21049
Drosophila erecta
FBgn0113232
N
0.000
GG22189
Drosophila erecta
FBgn0114363
N
0.000
GH21366
Drosophila grimshawi
FBgn0128828
N
0.000
GH21368
Drosophila grimshawi
FBgn0128830
N
0.000
GH21401
Drosophila grimshawi
FBgn0128863
N
0.000
BGIBMGA014155
Bombyx mori
BGIBMGA014155
N
0.000