CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM11
(
Ornithorhynchus anatinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOANG00000008231
T39502_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000013076
RRM
12
81
VFVGNLESRVREEILYELFLQAGPLIKVTICKDKEGKPKSFGFVCFKHTESVSYAIALLNGIRLYGRPIN
ENSOANP00000013077
RRM
12
81
VFVGNLESRVREEILYELFLQAGPLIKVTICKDKEGKPKSFGFVCFKHTESVSYAIALLNGIRLYGRPIN
Links
Other
RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
40 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSACAG00000000494
Anolis carolinensis
ENSACAG00000000494
N
0.871
D3ZQ24_RAT
Rattus norvegicus
ENSRNOG00000029147
N
0.914
RBM11
Pan troglodytes
ENSPTRG00000013786
N
0.943
RBM7
Pan troglodytes
ENSPTRG00000004305
N
0.700
ENSPPYG00000011285
Pongo pygmaeus
ENSPPYG00000011285
N
0.943
ENSPPYG00000003894
Pongo pygmaeus
ENSPPYG00000003894
N
0.700
RBM11
Procavia capensis
ENSPCAG00000008368
N
0.943
RBM11
Otolemur garnettii
ENSOGAG00000005760
N
0.914
RBM11
Oryctolagus cuniculus
ENSOCUG00000010409
N
0.943
RBM11
Sorex araneus
ENSSARG00000001717
N
0.957
RBM11
Sus scrofa
ENSSSCG00000012005
N
0.914
AAH68729
Xenopus laevis
AAH68729
N
0.786
Ame_R002220
Ailuropoda melanoleuca
Ame_R002220
N
0.929
rbm11
Xenopus tropicalis
ENSXETG00000005847
N
0.800
RBM11
Vicugna pacos
ENSVPAG00000000673
N
0.729
RBM11
Tursiops truncatus
ENSTTRG00000007410
N
0.943
RBM7
Tarsius syrichta
ENSTSYG00000013731
N
0.700
RBM11
Tarsius syrichta
ENSTSYG00000003871
N
0.943
RBM11
Spermophilus tridecemlineatus
ENSSTOG00000013759
N
0.871
Rbm11
Mus musculus
ENSMUSG00000032940
N
0.914
RBM11
Felis catus
ENSFCAG00000018199
N
0.943
Rbm11
Dipodomys ordii
ENSDORG00000000801
N
0.943
LOC100403943
Callithrix jacchus
ENSCJAG00000011949
N
0.700
RBM11
Callithrix jacchus
ENSCJAG00000003218
N
0.943
RBM11
Choloepus hoffmanni
ENSCHOG00000007826
N
0.929
RBM11
Canis familiaris
ENSCAFG00000008013
N
0.929
Q3SZP6_BOVIN
Bos taurus
ENSBTAG00000034467
N
0.943
Q3SZP6_BOVIN
Bos taurus
ENSBTAG00000034347
N
0.943
RBM7
Homo sapiens
ENSG00000076053
N
0.700
RBM11
Homo sapiens
ENSG00000185272
N
0.943
RBM11
Macaca mulatta
ENSMMUG00000020089
N
0.943
RBM7
Macaca mulatta
ENSMMUG00000012270
N
0.700
RBM11
Myotis lucifugus
ENSMLUG00000005721
N
0.943
RBM11
Macropus eugenii
ENSMEUG00000003535
N
0.929
RBM7
Loxodonta africana
ENSLAFG00000012444
N
0.700
RBM11
Loxodonta africana
ENSLAFG00000007082
N
0.943
RBM11
Gorilla gorilla
ENSGGOG00000025603
N
0.943
RBM7
Gorilla gorilla
ENSGGOG00000009941
N
0.700
AAH74235
Xenopus laevis
AAH74235
N
0.743