CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSACAG00000000494
(
Anolis carolinensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSACAG00000000494
T34586_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000000435
RRM
8
77
LFVGNLESRVQEEILYELFLQAGPITKVTVCKDKDGKPKAFGFVCFKHTESVPYAIALLNGIRLYGRPIK
Links
Other
RRM
family RBPs
Other
Anolis carolinensis
RBPs
59 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM11
Ornithorhynchus anatinus
ENSOANG00000008231
N
0.871
D3ZQ24_RAT
Rattus norvegicus
ENSRNOG00000029147
N
0.857
Rbm11
Mus musculus
ENSMUSG00000032940
N
0.857
Ame_R002220
Ailuropoda melanoleuca
Ame_R002220
N
0.843
RBM11
Canis familiaris
ENSCAFG00000008013
N
0.843
RBM11
Tursiops truncatus
ENSTTRG00000007410
N
0.843
RBM11
Myotis lucifugus
ENSMLUG00000005721
N
0.843
RBM11
Loxodonta africana
ENSLAFG00000007082
N
0.843
RBM11
Macropus eugenii
ENSMEUG00000003535
N
0.843
Q3SZP6_BOVIN
Bos taurus
ENSBTAG00000034467
N
0.843
RBM11
Oryctolagus cuniculus
ENSOCUG00000010409
N
0.843
Q3SZP6_BOVIN
Bos taurus
ENSBTAG00000034347
N
0.843
RBM11
Sus scrofa
ENSSSCG00000012005
N
0.843
RBM11
Pan troglodytes
ENSPTRG00000013786
N
0.843
ENSPPYG00000011285
Pongo pygmaeus
ENSPPYG00000011285
N
0.843
RBM11
Procavia capensis
ENSPCAG00000008368
N
0.843
RBM11
Gorilla gorilla
ENSGGOG00000025603
N
0.843
RBM11
Macaca mulatta
ENSMMUG00000020089
N
0.843
RBM11
Callithrix jacchus
ENSCJAG00000003218
N
0.843
Rbm11
Dipodomys ordii
ENSDORG00000000801
N
0.843
AAH68729
Xenopus laevis
AAH68729
N
0.843
RBM11
Felis catus
ENSFCAG00000018199
N
0.843
RBM11
Homo sapiens
ENSG00000185272
N
0.843
rbm11
Xenopus tropicalis
ENSXETG00000005847
N
0.829
RBM11
Tarsius syrichta
ENSTSYG00000003871
N
0.829
RBM11
Choloepus hoffmanni
ENSCHOG00000007826
N
0.829
RBM11
Sorex araneus
ENSSARG00000001717
N
0.829
RBM11
Otolemur garnettii
ENSOGAG00000005760
N
0.814
RBM11
Spermophilus tridecemlineatus
ENSSTOG00000013759
N
0.786
AAH74235
Xenopus laevis
AAH74235
N
0.771
RBM7
Echinops telfairi
ENSETEG00000015869
N
0.743
ENSPPYG00000003894
Pongo pygmaeus
ENSPPYG00000003894
N
0.729
RBM7
Loxodonta africana
ENSLAFG00000012444
N
0.729
RBM7
Homo sapiens
ENSG00000076053
N
0.729
RBM7
Tarsius syrichta
ENSTSYG00000013731
N
0.729
LOC100403943
Callithrix jacchus
ENSCJAG00000011949
N
0.729
RBM7
Pan troglodytes
ENSPTRG00000004305
N
0.729
RBM7
Macaca mulatta
ENSMMUG00000012270
N
0.729
RBM7
Gorilla gorilla
ENSGGOG00000009941
N
0.729
RBM7
Sus scrofa
ENSSSCG00000015057
N
0.714
RBM7
Oryctolagus cuniculus
ENSOCUG00000003342
N
0.714
RBM7
Tupaia belangeri
ENSTBEG00000008650
N
0.714
RBM7_BOVIN
Bos taurus
ENSBTAG00000008219
N
0.714
RBM7
Tursiops truncatus
ENSTTRG00000001515
N
0.714
RBM7
Canis familiaris
ENSCAFG00000013514
N
0.714
RBM7
Dasypus novemcinctus
ENSDNOG00000018423
N
0.714
RBM7
Choloepus hoffmanni
ENSCHOG00000012747
N
0.714
RBM7
Microcebus murinus
ENSMICG00000010087
N
0.714
RBM7
Pteropus vampyrus
ENSPVAG00000005294
N
0.714
RBM7
Vicugna pacos
ENSVPAG00000006300
N
0.714
RBM7
Felis catus
ENSFCAG00000015443
N
0.714
Ame_R015252
Ailuropoda melanoleuca
Ame_R015252
N
0.700
Rbm7
Mus musculus
ENSMUSG00000042396
N
0.700
RBM7
Erinaceus europaeus
ENSEEUG00000015854
N
0.700
LOC100062305
Equus caballus
ENSECAG00000004636
N
0.700
RBM7
Macropus eugenii
ENSMEUG00000006187
N
0.700
RBM7
Monodelphis domestica
ENSMODG00000013918
N
0.700
RBM7
Ochotona princeps
ENSOPRG00000011060
N
0.700
Rbm7
Rattus norvegicus
ENSRNOG00000005710
N
0.700