CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ESRP2
(
Ornithorhynchus anatinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOANG00000010972
T39533_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ESRP2
M141_0.6
Homo sapiens
UGGGRAD
RNAcompete
Ray et al.(2013)
RNCMPT00150
0.759
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000017385
RRM
251
320
IRARGLPWQSSDQHIARFFIGLNIAKGGVALCLNAQGRRNGEALVRFVNSDHRDLALERHKHHMGSRYIE
ENSOANP00000017385
RRM
352
424
IRLRGLPFSATPDDVLGFLGPECPVTGGPEGLLFVRYPDGRPTGDAFALFACEDAAQSALRRHKGILGKRYIE
ENSOANP00000017385
RRM
472
544
VRLRGLPYTAGIDDVLDFMGEATADIRPHGVHMVLNQQGRPSGDAFIQMKSAERAQVAAQRCHKKMMKERYVE
ENSOANP00000017386
RRM
229
298
IRARGLPWQSSDQHIARFFIGLNIAKGGVALCLNAQGRRNGEALVRFVNSDHRDLALERHKHHMGSRYIE
ENSOANP00000017386
RRM
330
402
IRLRGLPFSATPDDVLGFLGPECPVTGGPEGLLFVRYPDGRPTGDAFALFACEDAAQSALRRHKGILGKRYIE
ENSOANP00000017386
RRM
450
522
VRLRGLPYTAGIDDVLDFMGEATADIRPHGVHMVLNQQGRPSGDAFIQMKSAERAQVAAQRCHKKMMKERYVE
Links
Other
RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
70 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ESRP2
Homo sapiens
ENSG00000103067
D
0.759
Q7ZY29
Xenopus laevis
Q7ZY29
I
0.778
ESRP2
Pan troglodytes
ENSPTRG00000008261
I
0.755
ENSPPYG00000018753
Pongo pygmaeus
ENSPPYG00000018753
I
0.778
ENSPPYG00000007484
Pongo pygmaeus
ENSPPYG00000007484
I
0.755
ESRP2
Procavia capensis
ENSPCAG00000005215
I
0.856
ESRP2
Ochotona princeps
ENSOPRG00000013401
I
0.824
ESRP1
Oryctolagus cuniculus
ENSOCUG00000001316
I
0.782
ESRP2
Oryctolagus cuniculus
ENSOCUG00000001242
I
0.750
ESRP1
Ornithorhynchus anatinus
ENSOANG00000004746
I
0.778
Esrp2
Mus musculus
ENSMUSG00000084128
I
0.745
Esrp1
Mus musculus
ENSMUSG00000040728
I
0.769
ESRP1
Monodelphis domestica
ENSMODG00000007268
I
0.769
ESRP2
Monodelphis domestica
ENSMODG00000005183
I
0.856
ESRP2
Macaca mulatta
ENSMMUG00000021846
I
0.750
ESRP1
Pan troglodytes
ENSPTRG00000020430
I
0.778
ESRP1
Pteropus vampyrus
ENSPVAG00000014513
I
0.782
AAH44002
Xenopus laevis
AAH44002
I
0.778
Ame_R015210
Ailuropoda melanoleuca
Ame_R015210
I
0.782
Ame_R011562
Ailuropoda melanoleuca
Ame_R011562
I
0.750
esrp1
Xenopus tropicalis
ENSXETG00000014667
I
0.778
ESRP1
Vicugna pacos
ENSVPAG00000006566
I
0.787
ESRP2
Tursiops truncatus
ENSTTRG00000014613
I
0.745
ESRP1
Tursiops truncatus
ENSTTRG00000004226
I
0.782
ESRP1
Tarsius syrichta
ENSTSYG00000006036
I
0.778
RBM35A
Taeniopygia guttata
ENSTGUG00000011907
I
0.773
RBM35B
Taeniopygia guttata
ENSTGUG00000006986
I
0.852
ESRP1
Sus scrofa
ENSSSCG00000006099
I
0.782
ESRP2
Sorex araneus
ENSSARG00000014176
I
0.838
Esrp2
Rattus norvegicus
ENSRNOG00000023177
I
0.838
RGD1560481
Rattus norvegicus
ENSRNOG00000008184
I
0.773
ESRP2
Pteropus vampyrus
ENSPVAG00000016626
I
0.713
ESRP1
Macaca mulatta
ENSMMUG00000021112
I
0.769
ESRP2
Myotis lucifugus
ENSMLUG00000005934
I
0.843
ESRP2
Microcebus murinus
ENSMICG00000011382
I
0.736
LOC100066567
Equus caballus
ENSECAG00000017375
I
0.741
ESRP1
Equus caballus
ENSECAG00000000784
I
0.782
Esrp2
Dipodomys ordii
ENSDORG00000000665
I
0.833
ESRP2
Dasypus novemcinctus
ENSDNOG00000018588
I
0.824
esrp2
Danio rerio
ENSDARG00000018814
I
0.847
esrp1
Danio rerio
ENSDARG00000011245
I
0.773
ESRP1
Cavia porcellus
ENSCPOG00000012197
I
0.778
LOC100388530
Callithrix jacchus
ENSCJAG00000015709
I
0.750
LOC100386717
Callithrix jacchus
ENSCJAG00000000043
I
0.778
ESRP2
Canis familiaris
ENSCAFG00000020320
I
0.750
ESRP1
Canis familiaris
ENSCAFG00000009305
I
0.782
LOC788414
Bos taurus
ENSBTAG00000021838
I
0.787
ESRP2
Bos taurus
ENSBTAG00000004375
I
0.741
ESRP2
Anolis carolinensis
ENSACAG00000009900
I
0.861
ESRP1
Erinaceus europaeus
ENSEEUG00000001673
I
0.778
ESRP2
Erinaceus europaeus
ENSEEUG00000014033
I
0.750
ESRP2
Echinops telfairi
ENSETEG00000006068
I
0.852
ESRP1
Microcebus murinus
ENSMICG00000008757
I
0.778
ESRP1
Meleagris gallopavo
ENSMGAG00000012042
I
0.769
ESRP2
Meleagris gallopavo
ENSMGAG00000003943
I
0.870
ESRP2
Macropus eugenii
ENSMEUG00000014322
I
0.894
ESRP2
Loxodonta africana
ENSLAFG00000014609
I
0.833
ESRP1
Loxodonta africana
ENSLAFG00000001498
I
0.778
ESRP2
Gorilla gorilla
ENSGGOG00000010150
I
0.759
ESRP1
Gorilla gorilla
ENSGGOG00000003627
I
0.778
RBM35A
Gallus gallus
ENSGALG00000015968
I
0.778
ESRP2_CHICK
Gallus gallus
ENSGALG00000003374
I
0.870
ESRP1
Homo sapiens
ENSG00000104413
I
0.778
ESRP2
Felis catus
ENSFCAG00000010419
I
0.750
ESRP1
Felis catus
ENSFCAG00000009920
I
0.782
ESRP1
Anolis carolinensis
ENSACAG00000003748
I
0.773
ESRP1
Takifugu rubripes
ENSTRUG00000009287
N
0.730
ESRP1
Tetraodon nigroviridis
ENSTNIG00000018367
N
0.739
ESRP2
Gasterosteus aculeatus
ENSGACG00000016359
N
0.825