CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ESRP2
(
Sorex araneus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSSARG00000014176
T41380_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ESRP2
M141_0.6
Homo sapiens
UGGGRAD
RNAcompete
Ray et al.(2013)
RNCMPT00150
0.870
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000012823
RRM
249
317
VRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI
ENSSARP00000012823
RRM
350
422
LRLRGLPFSAGPADVLDFLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALGRHKGMLGKRYIE
ENSSARP00000012823
RRM
467
539
VRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAATQRCHKKVMKERYVE
Links
Other
RRM
family RBPs
Other
Sorex araneus
RBPs
69 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ESRP2
Homo sapiens
ENSG00000103067
D
0.870
Ame_R015210
Ailuropoda melanoleuca
Ame_R015210
I
0.769
ENSPPYG00000007484
Pongo pygmaeus
ENSPPYG00000007484
I
0.870
ESRP2
Procavia capensis
ENSPCAG00000005215
I
0.977
ESRP2
Ochotona princeps
ENSOPRG00000013401
I
0.958
ESRP1
Oryctolagus cuniculus
ENSOCUG00000001316
I
0.773
ESRP2
Oryctolagus cuniculus
ENSOCUG00000001242
I
0.874
ESRP2
Ornithorhynchus anatinus
ENSOANG00000010972
I
0.838
ESRP1
Ornithorhynchus anatinus
ENSOANG00000004746
I
0.769
Esrp2
Mus musculus
ENSMUSG00000084128
I
0.856
Esrp1
Mus musculus
ENSMUSG00000040728
I
0.759
ESRP1
Monodelphis domestica
ENSMODG00000007268
I
0.764
ESRP2
Monodelphis domestica
ENSMODG00000005183
I
0.838
ESRP2
Macaca mulatta
ENSMMUG00000021846
I
0.865
ENSPPYG00000018753
Pongo pygmaeus
ENSPPYG00000018753
I
0.773
ESRP2
Pan troglodytes
ENSPTRG00000008261
I
0.870
Ame_R011562
Ailuropoda melanoleuca
Ame_R011562
I
0.865
ESRP1
Vicugna pacos
ENSVPAG00000006566
I
0.773
ESRP2
Tursiops truncatus
ENSTTRG00000014613
I
0.856
ESRP1
Tursiops truncatus
ENSTTRG00000004226
I
0.769
ESRP1
Tarsius syrichta
ENSTSYG00000006036
I
0.773
RBM35B
Taeniopygia guttata
ENSTGUG00000006986
I
0.782
ESRP1
Sus scrofa
ENSSSCG00000006099
I
0.769
Esrp2
Rattus norvegicus
ENSRNOG00000023177
I
0.972
RGD1560481
Rattus norvegicus
ENSRNOG00000008184
I
0.764
ESRP2
Pteropus vampyrus
ENSPVAG00000016626
I
0.819
ESRP1
Pteropus vampyrus
ENSPVAG00000014513
I
0.769
ESRP1
Pan troglodytes
ENSPTRG00000020430
I
0.773
ESRP1
Macaca mulatta
ENSMMUG00000021112
I
0.764
ESRP2
Myotis lucifugus
ENSMLUG00000005934
I
0.991
ESRP1
Equus caballus
ENSECAG00000000784
I
0.769
Esrp2
Dipodomys ordii
ENSDORG00000000665
I
0.944
ESRP2
Dasypus novemcinctus
ENSDNOG00000018588
I
0.958
esrp2
Danio rerio
ENSDARG00000018814
I
0.787
ESRP1
Cavia porcellus
ENSCPOG00000012197
I
0.769
LOC100388530
Callithrix jacchus
ENSCJAG00000015709
I
0.865
LOC100386717
Callithrix jacchus
ENSCJAG00000000043
I
0.773
ESRP2
Canis familiaris
ENSCAFG00000020320
I
0.865
ESRP1
Canis familiaris
ENSCAFG00000009305
I
0.769
LOC788414
Bos taurus
ENSBTAG00000021838
I
0.769
ESRP2
Bos taurus
ENSBTAG00000004375
I
0.860
ESRP2
Anolis carolinensis
ENSACAG00000009900
I
0.792
LOC100066567
Equus caballus
ENSECAG00000017375
I
0.860
ESRP1
Erinaceus europaeus
ENSEEUG00000001673
I
0.759
ESRP2
Echinops telfairi
ENSETEG00000006068
I
0.977
ESRP2
Microcebus murinus
ENSMICG00000011382
I
0.837
ESRP1
Microcebus murinus
ENSMICG00000008757
I
0.769
ESRP2
Meleagris gallopavo
ENSMGAG00000003943
I
0.796
ESRP2
Macropus eugenii
ENSMEUG00000014322
I
0.870
ESRP2
Loxodonta africana
ENSLAFG00000014609
I
0.953
ESRP1
Loxodonta africana
ENSLAFG00000001498
I
0.769
ESRP2
Gorilla gorilla
ENSGGOG00000010150
I
0.870
ESRP1
Gorilla gorilla
ENSGGOG00000003627
I
0.773
ESRP2_CHICK
Gallus gallus
ENSGALG00000003374
I
0.796
ESRP1
Homo sapiens
ENSG00000104413
I
0.773
ESRP2
Felis catus
ENSFCAG00000010419
I
0.865
ESRP1
Felis catus
ENSFCAG00000009920
I
0.769
ESRP1
Anolis carolinensis
ENSACAG00000003748
I
0.773