RBM35B (Taeniopygia guttata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTGUG00000006986 T41919_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ESRP2
M141_0.6 		Homo sapiens UGGGRAD RNAcompete
Ray et al.(2013)
RNCMPT00150 		0.718
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000007202 RRM 232 301
ENSTGUP00000007202 RRM 333 405
ENSTGUP00000007202 RRM 453 525

Links

Other RRM family RBPs
Other Taeniopygia guttata RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ESRP2 Homo sapiens ENSG00000103067 D 0.718
AAH44002 Xenopus laevis AAH44002 I 0.829
ESRP2 Procavia capensis ENSPCAG00000005215 I 0.792
ESRP2 Ochotona princeps ENSOPRG00000013401 I 0.769
ESRP1 Oryctolagus cuniculus ENSOCUG00000001316 I 0.824
ESRP2 Oryctolagus cuniculus ENSOCUG00000001242 I 0.708
ESRP2 Ornithorhynchus anatinus ENSOANG00000010972 I 0.852
ESRP1 Ornithorhynchus anatinus ENSOANG00000004746 I 0.819
Esrp2 Mus musculus ENSMUSG00000084128 I 0.704
Esrp1 Mus musculus ENSMUSG00000040728 I 0.815
ESRP1 Monodelphis domestica ENSMODG00000007268 I 0.824
ESRP2 Monodelphis domestica ENSMODG00000005183 I 0.838
ESRP2 Macaca mulatta ENSMMUG00000021846 I 0.713
ESRP1 Macaca mulatta ENSMMUG00000021112 I 0.810
ESRP2 Myotis lucifugus ENSMLUG00000005934 I 0.782
ENSPPYG00000007484 Pongo pygmaeus ENSPPYG00000007484 I 0.713
ENSPPYG00000018753 Pongo pygmaeus ENSPPYG00000018753 I 0.819
ESRP2 Pan troglodytes ENSPTRG00000008261 I 0.713
Ame_R015210 Ailuropoda melanoleuca Ame_R015210 I 0.815
Ame_R011562 Ailuropoda melanoleuca Ame_R011562 I 0.708
esrp1 Xenopus tropicalis ENSXETG00000014667 I 0.829
ESRP1 Vicugna pacos ENSVPAG00000006566 I 0.819
ESRP1 Tursiops truncatus ENSTTRG00000004226 I 0.815
ESRP1 Tarsius syrichta ENSTSYG00000006036 I 0.819
Q7ZY29 Xenopus laevis Q7ZY29 I 0.829
RBM35A Taeniopygia guttata ENSTGUG00000011907 I 0.824
ESRP1 Sus scrofa ENSSSCG00000006099 I 0.815
ESRP2 Sorex araneus ENSSARG00000014176 I 0.782
Esrp2 Rattus norvegicus ENSRNOG00000023177 I 0.778
RGD1560481 Rattus norvegicus ENSRNOG00000008184 I 0.815
ESRP1 Pteropus vampyrus ENSPVAG00000014513 I 0.815
ESRP1 Pan troglodytes ENSPTRG00000020430 I 0.819
ESRP1 Microcebus murinus ENSMICG00000008757 I 0.819
ESRP1 Meleagris gallopavo ENSMGAG00000012042 I 0.810
ESRP1 Equus caballus ENSECAG00000000784 I 0.815
Esrp2 Dipodomys ordii ENSDORG00000000665 I 0.787
ESRP2 Dasypus novemcinctus ENSDNOG00000018588 I 0.778
esrp2 Danio rerio ENSDARG00000018814 I 0.912
esrp1 Danio rerio ENSDARG00000011245 I 0.782
ESRP1 Cavia porcellus ENSCPOG00000012197 I 0.819
LOC100388530 Callithrix jacchus ENSCJAG00000015709 I 0.713
LOC100386717 Callithrix jacchus ENSCJAG00000000043 I 0.819
ESRP2 Canis familiaris ENSCAFG00000020320 I 0.708
ESRP1 Canis familiaris ENSCAFG00000009305 I 0.815
LOC788414 Bos taurus ENSBTAG00000021838 I 0.819
ESRP2 Bos taurus ENSBTAG00000004375 I 0.704
ESRP2 Anolis carolinensis ENSACAG00000009900 I 0.949
ESRP1 Anolis carolinensis ENSACAG00000003748 I 0.810
LOC100066567 Equus caballus ENSECAG00000017375 I 0.704
ESRP1 Erinaceus europaeus ENSEEUG00000001673 I 0.810
ESRP2 Meleagris gallopavo ENSMGAG00000003943 I 0.981
ESRP2 Macropus eugenii ENSMEUG00000014322 I 0.866
ESRP2 Loxodonta africana ENSLAFG00000014609 I 0.778
ESRP1 Loxodonta africana ENSLAFG00000001498 I 0.819
ESRP2 Gorilla gorilla ENSGGOG00000010150 I 0.718
ESRP1 Gorilla gorilla ENSGGOG00000003627 I 0.819
RBM35A Gallus gallus ENSGALG00000015968 I 0.819
ESRP2_CHICK Gallus gallus ENSGALG00000003374 I 0.981
ESRP1 Homo sapiens ENSG00000104413 I 0.819
ESRP2 Felis catus ENSFCAG00000010419 I 0.708
ESRP1 Felis catus ENSFCAG00000009920 I 0.815
ESRP2 Echinops telfairi ENSETEG00000006068 I 0.792
ESRP2 Erinaceus europaeus ENSEEUG00000014033 I 0.708
ESRP1 Tetraodon nigroviridis ENSTNIG00000018367 N 0.743
ESRP2 Gasterosteus aculeatus ENSGACG00000016359 N 0.899
Esrp1 Dipodomys ordii ENSDORG00000011987 N 0.704
ESRP1 Takifugu rubripes ENSTRUG00000009287 N 0.721