CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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rbm15b
(
Xenopus tropicalis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSXETG00000000072
T42814_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXETP00000000136
RRM
4
74
LLISNLGSALPDPLLEDWLFRHFQRFGDISVKLSHTPELGRVAYINFRRPAEARQARHAKVRPVLYDRQLR
ENSXETP00000000136
RRM
163
232
LFIGNLDHMVSEVDLRRAFDKYGPIEEVVIKRPGRGQGAAYAFLRFQNLDMAHRAKLAMSGRLLGRNAMK
ENSXETP00000000136
RRM
244
308
LWVGGLGPNTSLAALAREFDRFGSIRTVDYVKGDSFAYIQYESLDAAQAACTQMRGFALGDRRLR
Links
Other
RRM
family RBPs
Other
Xenopus tropicalis
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_03836
Arthroderma benhamiae
ARB_03836
N
0.000
MCYG_03501
Microsporum canis
MCYG_03501
N
0.000
TEQG_01215
Trichophyton equinum
TEQG_01215
N
0.000
TERG_04929
Trichophyton rubrum
TERG_04929
N
0.000
TESG_05938
Trichophyton tonsurans
TESG_05938
N
0.000
TRV_01755
Trichophyton verrucosum
TRV_01755
N
0.000