CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GH14211
(
Drosophila grimshawi
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0121687
T43468_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0148117
RRM
64
130
AFVGNLPKGLVQGDVMKIFEDFEVKNVRLIKDRETDEFKGYGYVEFTTLDQLKRALSRNGRIKLDNL
Links
Other
RRM
family RBPs
Other
Drosophila grimshawi
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BRUNOL4
Homo sapiens
ENSG00000101489
D
0.000
BRUNOL5
Homo sapiens
ENSG00000161082
D
0.000
CELF5
Pan troglodytes
ENSPTRG00000010259
I
0.000
LOC100386457
Callithrix jacchus
ENSCJAG00000021135
I
0.000
CELF3
Pan troglodytes
ENSPTRG00000001293
I
0.000
CELF4
Macaca mulatta
ENSMMUG00000006866
I
0.000
ENSPPYG00000009118
Pongo pygmaeus
ENSPPYG00000009118
I
0.000
Brunol5
Rattus norvegicus
ENSRNOG00000004695
N
0.000
CELF4
Tarsius syrichta
ENSTSYG00000000816
N
0.000
fgenesh2_pg.scaffold_186000062
Branchiostoma floridae
fgenesh2_pg.scaffold_186000062
N
0.000
NCBI_GNO_7600086
Daphnia pulex
NCBI_GNO_7600086
N
0.000
CELF6
Canis familiaris
ENSCAFG00000017695
N
0.000
CELF4
Procavia capensis
ENSPCAG00000000126
N
0.000
CELF5
Ornithorhynchus anatinus
ENSOANG00000009501
N
0.000
Celf5
Mus musculus
ENSMUSG00000034818
N
0.000
CELF5
Gallus gallus
ENSGALG00000017694
N
0.000
Ame_R008026
Ailuropoda melanoleuca
Ame_R008026
N
0.000