ENSPPYG00000009118 (Pongo pygmaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPPYG00000009118 T40501_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.995
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.773
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.749
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000010242 RRM 56 125
ENSPPYP00000010242 RRM 154 222
ENSPPYP00000010242 RRM 396 445
ENSPPYP00000010243 RRM 56 125
ENSPPYP00000010243 RRM 144 212
ENSPPYP00000010243 RRM 371 407
ENSPPYP00000010244 RRM 56 125
ENSPPYP00000010244 RRM 154 222
ENSPPYP00000010245 RRM 56 125
ENSPPYP00000010245 RRM 153 221

Links

Other RRM family RBPs
Other Pongo pygmaeus RBPs

83 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRUNOL4 Homo sapiens ENSG00000101489 D 1.000
Celf4 Mus musculus ENSMUSG00000024268 I 1.000
LOC100386457 Callithrix jacchus ENSCJAG00000021135 I 1.000
CELF4 Pan troglodytes ENSPTRG00000009982 N 1.000
CELF4 Gorilla gorilla ENSGGOG00000013920 I 0.995
CELF4 Pteropus vampyrus ENSPVAG00000009204 I 0.995
ACH69784 Xenopus laevis ACH69784 I 0.995
CELF4 Tursiops truncatus ENSTTRG00000016826 I 0.989
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.931
CELF4 Ochotona princeps ENSOPRG00000014415 I 0.895
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.891
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.891
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.886
A6H776_BOVIN Bos taurus ENSBTAG00000004940 I 0.868
CELF6 Macropus eugenii ENSMEUG00000010988 I 0.860
CELF4 Macaca mulatta ENSMMUG00000006866 I 0.847
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.847
CELF4 Oryzias latipes ENSORLG00000008913 I 0.844
BRUNOL5 Homo sapiens ENSG00000161082 D 0.842
CELF4 Takifugu rubripes ENSTRUG00000015481 I 0.831
CELF4 Tetraodon nigroviridis ENSTNIG00000010679 I 0.825
Brunol5 Rattus norvegicus ENSRNOG00000004695 N 0.820
Celf5 Mus musculus ENSMUSG00000034818 N 0.820
ENSDARG00000076682 Danio rerio ENSDARG00000076682 I 0.812
CELF6 Canis familiaris ENSCAFG00000017695 N 0.799
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.799
celf5 Danio rerio ENSDARG00000071375 I 0.796
CELF5 Oryzias latipes ENSORLG00000004600 I 0.791
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.787
CELF6 Tursiops truncatus ENSTTRG00000002503 I 0.787
NCBI_GNO_7600086 Daphnia pulex NCBI_GNO_7600086 N 0.784
ACH69785 Xenopus laevis ACH69785 I 0.777
CELF4 Procavia capensis ENSPCAG00000000126 N 0.777
CELF3 Pan troglodytes ENSPTRG00000001293 I 0.777
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.777
Q91579 Xenopus laevis Q91579 I 0.768
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.768
AAA81375 Xenopus laevis AAA81375 I 0.768
estExt_Genewise1Plus.C_6380019 Capitella teleta estExt_Genewise1Plus.C_6380019 I 0.768
AAH72134 Xenopus laevis AAH72134 I 0.768
AAH57704 Xenopus laevis AAH57704 I 0.768
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.768
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.763
AAH46942 Xenopus laevis AAH46942 I 0.763
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.763
CELF4 Tarsius syrichta ENSTSYG00000000816 N 0.763
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.758
celf3 Danio rerio ENSDARG00000034668 I 0.758
Celf6 Mus musculus ENSMUSG00000032297 I 0.758
CELF6 Meleagris gallopavo ENSMGAG00000001804 I 0.757
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.754
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.754
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.754
HEXA Macaca mulatta ENSMMUG00000010687 I 0.754
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.754
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.754
CELF6 Bos taurus ENSBTAG00000014092 I 0.754
CELF6 Sus scrofa ENSSSCG00000001928 I 0.754
CELF6 Felis catus ENSFCAG00000016249 I 0.754
BRUNOL6 Homo sapiens ENSG00000140488 D 0.754
ENSPPYG00000006615 Pongo pygmaeus ENSPPYG00000006615 I 0.749
CELF4 Gasterosteus aculeatus ENSGACG00000008752 I 0.748
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.745
CELF4 Otolemur garnettii ENSOGAG00000010018 I 0.742
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.739
CELF3 Danio rerio ENSDARG00000006983 I 0.733
CELF3 Oryzias latipes ENSORLG00000010447 I 0.721
CELF3 Canis familiaris ENSCAFG00000012794 I 0.716
CELF3 Callithrix jacchus ENSCJAG00000007857 I 0.716
CELF3_BOVIN Bos taurus ENSBTAG00000019131 I 0.716
Ame_R007421 Ailuropoda melanoleuca Ame_R007421 I 0.716
D4A916_RAT Rattus norvegicus ENSRNOG00000020875 I 0.716
CELF3 Cavia porcellus ENSCPOG00000003539 I 0.716
B7NZE2_RABIT Oryctolagus cuniculus ENSOCUG00000003551 I 0.716
Celf3 Mus musculus ENSMUSG00000028137 I 0.716
ENSGGOG00000021973 Gorilla gorilla ENSGGOG00000021973 I 0.716
CELF3 Loxodonta africana ENSLAFG00000030147 I 0.716
CELF3 Homo sapiens ENSG00000159409 I 0.716
CELF3 Equus caballus ENSECAG00000020365 I 0.716
CELF3 Monodelphis domestica ENSMODG00000018897 I 0.716
CELF5 Gallus gallus ENSGALG00000017694 N 0.712
CELF3 Sus scrofa ENSSSCG00000006618 I 0.701