CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FBgn0262734
(
Drosophila melanogaster
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0262734
T44430_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0074055
RRM
31
97
AFVGNLPQGLVQGDVIKIFQDFEVKYVRLVKDRETDQFKGFCYVEFETLDNLERALECDGRIKLDDL
FBpp0074056
RRM
30
96
AFVGNLPQGLVQGDVIKIFQDFEVKYVRLVKDRETDQFKGFCYVEFETLDNLERALECDGRIKLDDL
FBpp0089381
RRM
31
97
AFVGNLPQGLVQGDVIKIFQDFEVKYVRLVKDRETDQFKGFCYVEFETLDNLERALECDGRIKLDDL
Links
Other
RRM
family RBPs
Other
Drosophila melanogaster
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CG1340
Drosophila melanogaster
FBgn0039797
N
0.735
GM12901
Drosophila sechellia
FBgn0167833
N
0.735
GM13442
Drosophila sechellia
FBgn0168373
N
1.000
GD21542
Drosophila simulans
FBgn0192968
N
0.735
GJ19028
Drosophila virilis
FBgn0206174
N
0.940
GJ24240
Drosophila virilis
FBgn0211322
N
0.761
GK14152
Drosophila willistoni
FBgn0216158
N
0.750
GK25675
Drosophila willistoni
FBgn0227634
N
0.985
GE10899
Drosophila yakuba
FBgn0228732
N
0.750
GE17274
Drosophila yakuba
FBgn0234750
N
1.000
GL20267
Drosophila persimilis
FBgn0157862
N
0.925
GL13513
Drosophila persimilis
FBgn0151118
N
0.735
GA12257-RA
Drosophila pseudoobscura
FBgn0072303
N
0.735
GA18178-RA
Drosophila pseudoobscura
FBgn0078185
N
0.925
GF19517
Drosophila ananassae
FBgn0096524
N
0.985
GF22920
Drosophila ananassae
FBgn0099914
N
0.750
GG11771
Drosophila erecta
FBgn0104066
N
0.750
GG17966
Drosophila erecta
FBgn0110185
N
1.000
GH14211
Drosophila grimshawi
FBgn0121687
N
0.776
GH22433
Drosophila grimshawi
FBgn0129891
N
0.910
GI21487
Drosophila mojavensis
FBgn0144217
N
0.940