CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GI21487
(
Drosophila mojavensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0144217
T43642_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0170704
RRM
31
97
AYVGNLPQGLVQGDVMKIFNDFEVKNVRLVKDRETDQFKGFCYVEFETLDNLERALECDGRIKLDDL
Links
Other
RRM
family RBPs
Other
Drosophila mojavensis
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GJ19028
Drosophila virilis
FBgn0206174
N
1.000
GH22433
Drosophila grimshawi
FBgn0129891
N
0.970
GF19517
Drosophila ananassae
FBgn0096524
N
0.955
GK25675
Drosophila willistoni
FBgn0227634
N
0.955
GG17966
Drosophila erecta
FBgn0110185
N
0.940
FBgn0262734
Drosophila melanogaster
FBgn0262734
N
0.940
GE17274
Drosophila yakuba
FBgn0234750
N
0.940
GM13442
Drosophila sechellia
FBgn0168373
N
0.940
GA18178-RA
Drosophila pseudoobscura
FBgn0078185
N
0.925
GL20267
Drosophila persimilis
FBgn0157862
N
0.925
GF22920
Drosophila ananassae
FBgn0099914
N
0.794
GG11771
Drosophila erecta
FBgn0104066
N
0.794
GE10899
Drosophila yakuba
FBgn0228732
N
0.794
GK14152
Drosophila willistoni
FBgn0216158
N
0.794
GH14211
Drosophila grimshawi
FBgn0121687
N
0.791
GM12901
Drosophila sechellia
FBgn0167833
N
0.779
GA12257-RA
Drosophila pseudoobscura
FBgn0072303
N
0.779
GL13513
Drosophila persimilis
FBgn0151118
N
0.779
CG1340
Drosophila melanogaster
FBgn0039797
N
0.779
GD21542
Drosophila simulans
FBgn0192968
N
0.779
GJ24240
Drosophila virilis
FBgn0211322
N
0.761
AAEL004010
Aedes aegypti
AAEL004010
N
0.706