CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GK25675
(
Drosophila willistoni
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0227634
T44261_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0254818
RRM
31
97
AFVGNLPQGLVQGDVIKIFQDFEVKNVRLVKDRETDQFKGFCYVEFETLDNLERALECDGRIKLDDL
Links
Other
RRM
family RBPs
Other
Drosophila willistoni
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GF19517
Drosophila ananassae
FBgn0096524
N
1.000
GM13442
Drosophila sechellia
FBgn0168373
N
0.985
GG17966
Drosophila erecta
FBgn0110185
N
0.985
FBgn0262734
Drosophila melanogaster
FBgn0262734
N
0.985
GE17274
Drosophila yakuba
FBgn0234750
N
0.985
GJ19028
Drosophila virilis
FBgn0206174
N
0.955
GI21487
Drosophila mojavensis
FBgn0144217
N
0.955
GL20267
Drosophila persimilis
FBgn0157862
N
0.940
GA18178-RA
Drosophila pseudoobscura
FBgn0078185
N
0.940
GH22433
Drosophila grimshawi
FBgn0129891
N
0.925
GH14211
Drosophila grimshawi
FBgn0121687
N
0.791
GK14152
Drosophila willistoni
FBgn0216158
N
0.765
GE10899
Drosophila yakuba
FBgn0228732
N
0.765
GF22920
Drosophila ananassae
FBgn0099914
N
0.765
GG11771
Drosophila erecta
FBgn0104066
N
0.765
GJ24240
Drosophila virilis
FBgn0211322
N
0.761
CG1340
Drosophila melanogaster
FBgn0039797
N
0.750
GD21542
Drosophila simulans
FBgn0192968
N
0.750
GA12257-RA
Drosophila pseudoobscura
FBgn0072303
N
0.750
GL13513
Drosophila persimilis
FBgn0151118
N
0.750
GM12901
Drosophila sechellia
FBgn0167833
N
0.750
AAEL004010
Aedes aegypti
AAEL004010
N
0.706