CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AB08285.1
(
Alternaria brassicicola
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AB08285.1
T55428_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AB08285.1
RRM
11
81
VFIGNIPYGGTEELIIETLGRVGQVVNFRLVYDKETGRPKGFGFAEFADADAAASAVRNLNDYDLMGRKLR
Links
Other
RRM
family RBPs
Other
Alternaria brassicicola
RBPs
20 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AT2G41900
Arabidopsis thaliana
AT2G41900-TAIR-G
N
0.000
MDP0000673185
Malus x domestica
MDP0000673185
N
0.000
MDP0000320891
Malus x domestica
MDP0000320891
N
0.000
MDP0000200915
Malus x domestica
MDP0000200915
N
0.000
mgf012825m
Mimulus guttatus
mgf012825m
N
0.000
cassava36564.valid.m1
Manihot esculenta
cassava36564.valid.m1
N
0.000
B9HNW7_POPTR
Populus trichocarpa
POPTR_0009s05810
N
0.000
B9GF07_POPTR
Populus trichocarpa
POPTR_0001s26560
N
0.000
BRADI1G11760
Brachypodium distachyon
BRADI1G11760
N
0.000
MDP0000911962
Malus x domestica
MDP0000911962
N
0.000