MDP0000200915 (Malus x domestica)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 MDP0000200915 T06325_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000200915 CCCH ZF 268 289

Links

Other CCCH ZF family RBPs
Other Malus x domestica RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000911962 Malus x domestica MDP0000911962 N 1.000
ppa025636m Prunus persica ppa025636m N 0.909
MDP0000320891 Malus x domestica MDP0000320891 N 0.826
mgf012825m Mimulus guttatus mgf012825m N 0.826
cassava36564.valid.m1 Manihot esculenta cassava36564.valid.m1 N 0.826
AT2G41900 Arabidopsis thaliana AT2G41900-TAIR-G N 0.826
BRADI1G11760 Brachypodium distachyon BRADI1G11760 N 0.826
MDP0000673185 Malus x domestica MDP0000673185 N 0.826
B9HNW7_POPTR Populus trichocarpa POPTR_0009s05810 N 0.818
PK25575.1 Cannabis sativa PK25575.1 N 0.783
Medtr3g028690 Medicago truncatula Medtr3g028690 N 0.783
B9GF07_POPTR Populus trichocarpa POPTR_0001s26560 N 0.773
Glyma14g01990.1 Glycine max Glyma14g01990.1 N 0.739
MDP0000196475 Malus x domestica MDP0000196475 N 0.739
Glyma02g46610.1 Glycine max Glyma02g46610.1 N 0.739
POPTR_0008s06940 Populus trichocarpa POPTR_0008s06940 N 0.739
MDP0000699611 Malus x domestica MDP0000699611 N 0.739
B9HSM9_POPTR Populus trichocarpa POPTR_0010s19520 N 0.739
B9I454_POPTR Populus trichocarpa POPTR_0012s12760 N 0.739
Cucsa.139290 Cucumis sativus Cucsa.139290 N 0.739