PMAA_013050 (Penicillium marneffei)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PMAA_013050 T58257_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PMAA_013050.t1 RRM 4 74

Links

Other RRM family RBPs
Other Penicillium marneffei RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ARB_03747 Arthroderma benhamiae ARB_03747 N 0.740
AFUA_3G08580 Aspergillus fumigatus CADAFUAG00005852 N 0.803
An02g12270 Aspergillus niger CADANGAG00002750 N 0.789
ANIA_02989 Aspergillus nidulans CADANIAG00010091 N 0.775
AO090005001419 Aspergillus oryzae CADAORAG00003299 N 0.775
NFIA_068550 Neosartorya fischeri CADNFIAG00006348 N 0.803
estExt_fgenesh1_kg.C_chr_50164 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_50164 N 0.732
estExt_Genewise1Plus.C_12858 Trichoderma atroviride estExt_Genewise1Plus.C_12858 N 0.704
estExt_Genewise1Plus.C_31070 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_31070 N 0.718
estExt_Genewise1Plus.C_70764 Mycosphaerella fijiensis estExt_Genewise1Plus.C_70764 N 0.718
e_gw1.00866.790.1 Aspergillus carbonarius e_gw1.00866.790.1 N 0.718
Pc06g01290 Penicillium chrysogenum Pc06g01290 N 0.704
AFLA_086540 Aspergillus flavus CADAFLAG00001433 N 0.775
ACLA_036560 Aspergillus clavatus CADACLAG00003885 N 0.789
VDAG_03252 Verticillium dahliae VDAG_03252 N 0.704
BDBG_01954 Blastomyces dermatitidis BDBG_01954 N 0.803
CIMG_07653 Coccidioides immitis CIMG_07653 N 0.789
CPSG_09452 Coccidioides posadasii CPSG_09452 N 0.789
MCYG_06115 Microsporum canis MCYG_06115 N 0.859
MGYG_01973 Microsporum gypseum MGYG_01973 N 0.859
PABG_01590 Paracoccidioides brasiliensis PABG_01590 N 0.831
PTRG_07976 Pyrenophora tritici repentis PTRG_07976 N 0.704
SNOG_04431 Stagonospora nodorum SNOG_04431 N 0.718
TERG_04706 Trichophyton rubrum TERG_04706 N 0.873
TESG_06069 Trichophyton tonsurans TESG_06069 N 0.873
UREG_07630 Uncinocarpus reesii UREG_07630 N 0.803
Pc20g03510 Penicillium chrysogenum Pc20g03510 N 0.732