VDAG_03252 (Verticillium dahliae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 VDAG_03252 T31398_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
VDAG_03252T0 RRM 4 74

Links

Other RRM family RBPs
Other Verticillium dahliae RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GLRG_03991 Colletotrichum graminicola GLRG_03991 N 0.887
estExt_fgenesh5_pg.C_40456 Trichoderma reesei estExt_fgenesh5_pg.C_40456 N 0.859
estExt_Genewise1Plus.C_12858 Trichoderma atroviride estExt_Genewise1Plus.C_12858 N 0.859
FVEG_00902 Fusarium verticillioides FVEG_00902 N 0.845
FOXG_00610 Fusarium oxysporum FOXG_00610 N 0.845
FGSG_00442 Fusarium graminearum FGSG_00442 N 0.831
genemark.1698_g Thielavia terrestris genemark.1698_g N 0.817
estExt_Genewise1Plus.C_70764 Mycosphaerella fijiensis estExt_Genewise1Plus.C_70764 N 0.803
Pa_1_13615 Podospora anserina Pa_1_13615 N 0.803
gw1.9.437.1 Trichoderma virens gw1.9.437.1 N 0.789
gw1.6.738.1 Cryphonectria parasitica gw1.6.738.1 N 0.789
ACLA_036560 Aspergillus clavatus CADACLAG00003885 N 0.775
estExt_Genewise1Plus.C_31070 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_31070 N 0.775
gw1.2.3269.1 Myceliophthora thermophila gw1.2.3269.1 N 0.775
estExt_fgenesh1_kg.C_chr_50164 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_50164 N 0.775
MGG_04816 Magnaporthe oryzae MGG_04816 N 0.764
PTRG_07976 Pyrenophora tritici repentis PTRG_07976 N 0.761
GSTUMT00008723001 Tuber melanosporum GSTUMT00008723001 N 0.761
AO090005001419 Aspergillus oryzae CADAORAG00003299 N 0.761
AFLA_086540 Aspergillus flavus CADAFLAG00001433 N 0.761
CHGG_02784 Chaetomium globosum CHGG_02784 N 0.757
SNOG_04431 Stagonospora nodorum SNOG_04431 N 0.746
AB02963.1 Alternaria brassicicola AB02963.1 N 0.746
AFUA_3G08580 Aspergillus fumigatus CADAFUAG00005852 N 0.732
NFIA_068550 Neosartorya fischeri CADNFIAG00006348 N 0.732
fgenesh1_pg.sca_1_chr1_3_0000562 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000562 N 0.730
BC1G_05706 Botrytis cinerea BC1G_05706 N 0.718
SS1G_02886 Sclerotinia sclerotiorum SS1G_02886 N 0.714
TESG_06069 Trichophyton tonsurans TESG_06069 N 0.704
TERG_04706 Trichophyton rubrum TERG_04706 N 0.704
PMAA_013050 Penicillium marneffei PMAA_013050 N 0.704
Pc06g01290 Penicillium chrysogenum Pc06g01290 N 0.704