estExt_Genewise1Plus.C_12858 (Trichoderma atroviride)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1Plus.C_12858 T51371_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_12858 RRM 4 74

Links

Other RRM family RBPs
Other Trichoderma atroviride RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh5_pg.C_40456 Trichoderma reesei estExt_fgenesh5_pg.C_40456 N 0.972
FGSG_00442 Fusarium graminearum FGSG_00442 N 0.901
FOXG_00610 Fusarium oxysporum FOXG_00610 N 0.901
GLRG_03991 Colletotrichum graminicola GLRG_03991 N 0.901
gw1.9.437.1 Trichoderma virens gw1.9.437.1 N 0.901
FVEG_00902 Fusarium verticillioides FVEG_00902 N 0.901
genemark.1698_g Thielavia terrestris genemark.1698_g N 0.873
VDAG_03252 Verticillium dahliae VDAG_03252 N 0.859
Pa_1_13615 Podospora anserina Pa_1_13615 N 0.845
gw1.6.738.1 Cryphonectria parasitica gw1.6.738.1 N 0.831
gw1.2.3269.1 Myceliophthora thermophila gw1.2.3269.1 N 0.831
estExt_Genewise1Plus.C_70764 Mycosphaerella fijiensis estExt_Genewise1Plus.C_70764 N 0.817
SNOG_04431 Stagonospora nodorum SNOG_04431 N 0.817
MGG_04816 Magnaporthe oryzae MGG_04816 N 0.806
estExt_Genewise1Plus.C_31070 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_31070 N 0.803
estExt_fgenesh1_kg.C_chr_50164 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_50164 N 0.803
CHGG_02784 Chaetomium globosum CHGG_02784 N 0.797
PTRG_07976 Pyrenophora tritici repentis PTRG_07976 N 0.789
AFLA_086540 Aspergillus flavus CADAFLAG00001433 N 0.775
AB02963.1 Alternaria brassicicola AB02963.1 N 0.775
AO090005001419 Aspergillus oryzae CADAORAG00003299 N 0.775
fgenesh1_pg.sca_1_chr1_3_0000562 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000562 N 0.770
ACLA_036560 Aspergillus clavatus CADACLAG00003885 N 0.761
GSTUMT00008723001 Tuber melanosporum GSTUMT00008723001 N 0.761
SS1G_02886 Sclerotinia sclerotiorum SS1G_02886 N 0.753
AFUA_3G08580 Aspergillus fumigatus CADAFUAG00005852 N 0.746
NFIA_068550 Neosartorya fischeri CADNFIAG00006348 N 0.746
CPSG_09452 Coccidioides posadasii CPSG_09452 N 0.732
CIMG_07653 Coccidioides immitis CIMG_07653 N 0.732
MGYG_01973 Microsporum gypseum MGYG_01973 N 0.732
BC1G_05706 Botrytis cinerea BC1G_05706 N 0.731
MCYG_06115 Microsporum canis MCYG_06115 N 0.718
Pc06g01290 Penicillium chrysogenum Pc06g01290 N 0.718
EAT88191.2 Phaeosphaeria nodorum EAT88191.2 N 0.716
NCU02736 Neurospora crassa NCU02736 N 0.704
PMAA_013050 Penicillium marneffei PMAA_013050 N 0.704
TERG_04706 Trichophyton rubrum TERG_04706 N 0.704
TESG_06069 Trichophyton tonsurans TESG_06069 N 0.704
UREG_07630 Uncinocarpus reesii UREG_07630 N 0.704
ANIA_02989 Aspergillus nidulans CADANIAG00010091 N 0.704