SAMD4A (Takifugu rubripes)
SAM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00536 (SAM_1) IPR021129 ENSTRUG00000015288 T61831_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SAMD4A
M061_0.6 		Homo sapiens GCKGGHM RNAcompete
Ray et al.(2013)
RNCMPT00063 		0.820
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000039055 SAM 326 386
ENSTRUP00000039056 SAM 312 372
ENSTRUP00000039057 SAM 236 295
ENSTRUP00000039058 SAM 319 379

Links

Other SAM family RBPs
Other Takifugu rubripes RBPs

81 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SAMD4A Homo sapiens ENSG00000020577 D 0.852
SAMD4A Pteropus vampyrus ENSPVAG00000016060 I 0.852
SMAG1_RAT Rattus norvegicus ENSRNOG00000010489 I 0.852
Samd4b Rattus norvegicus ENSRNOG00000019831 I 0.738
SAMD4A Sorex araneus ENSSARG00000014067 I 0.852
SAMD4A Sus scrofa ENSSSCG00000005050 I 0.852
SAMD4B Sus scrofa ENSSSCG00000010706 I 0.738
SAMD4B Spermophilus tridecemlineatus ENSSTOG00000003379 I 0.738
SAMD4A Spermophilus tridecemlineatus ENSSTOG00000015276 I 0.852
SAMD4B Pteropus vampyrus ENSPVAG00000011118 I 0.738
SAMD4B Pan troglodytes ENSPTRG00000010961 I 0.738
SAMD4A Pan troglodytes ENSPTRG00000006364 I 0.852
SAMD4B Oryctolagus cuniculus ENSOCUG00000000343 I 0.738
SAMD4A Oryctolagus cuniculus ENSOCUG00000003420 I 0.852
ENSOPRG00000011493 Ochotona princeps ENSOPRG00000011493 I 0.767
SAMD4A Oryzias latipes ENSORLG00000005039 I 0.770
SAMD4B Procavia capensis ENSPCAG00000010263 I 0.738
SAMD4A Procavia capensis ENSPCAG00000010880 I 0.852
ENSPPYG00000005832 Pongo pygmaeus ENSPPYG00000005832 I 0.836
ENSPPYG00000009963 Pongo pygmaeus ENSPPYG00000009963 I 0.738
SAMD4B Tupaia belangeri ENSTBEG00000003890 I 0.738
SAMD4A Tupaia belangeri ENSTBEG00000010696 I 0.767
samd4a Xenopus tropicalis ENSXETG00000012217 I 0.754
ISCW008726 Ixodes scapularis ISCW008726 I 0.733
e_gw.8.543.1 Branchiostoma floridae e_gw.8.543.1 I 0.852
Ame_R007760 Ailuropoda melanoleuca Ame_R007760 I 0.852
Ame_R016005 Ailuropoda melanoleuca Ame_R016005 I 0.738
AAH74364 Xenopus laevis AAH74364 I 0.754
AAH89262 Xenopus laevis AAH89262 I 0.836
AAH92035 Xenopus laevis AAH92035 I 0.770
SAMD4B Vicugna pacos ENSVPAG00000011788 I 0.738
SAMD4A Tursiops truncatus ENSTTRG00000008280 I 0.852
SAMD4A Taeniopygia guttata ENSTGUG00000013086 I 0.852
ENSTGUG00000014163 Taeniopygia guttata ENSTGUG00000014163 I 0.770
ENSTNIG00000016193 Tetraodon nigroviridis ENSTNIG00000016193 I 0.770
ENSTNIG00000018801 Tetraodon nigroviridis ENSTNIG00000018801 I 0.984
ENSTRUG00000006063 Takifugu rubripes ENSTRUG00000006063 I 0.754
SAMD4A Tarsius syrichta ENSTSYG00000010165 I 0.852
SAMD4B Tursiops truncatus ENSTTRG00000003554 I 0.738
Q5FWP2 Xenopus laevis Q5FWP2 I 0.836
Samd4b Mus musculus ENSMUSG00000037513 I 0.738
SAMD4A Dasypus novemcinctus ENSDNOG00000015876 I 0.852
Samd4b Dipodomys ordii ENSDORG00000013482 I 0.738
SAMD4A Equus caballus ENSECAG00000010681 I 0.852
SAMD4B Equus caballus ENSECAG00000015551 I 0.738
SAMD4A Erinaceus europaeus ENSEEUG00000005738 I 0.869
SAMD4B Echinops telfairi ENSETEG00000004346 I 0.738
SAMD4A Echinops telfairi ENSETEG00000018627 I 0.852
SAMD4A Felis catus ENSFCAG00000000005 I 0.852
ENSDARG00000077784 Danio rerio ENSDARG00000077784 I 0.700
SAMD4A Danio rerio ENSDARG00000075759 I 0.902
A6QPG4_BOVIN Bos taurus ENSBTAG00000001468 I 0.852
SAMD4B Bos taurus ENSBTAG00000009785 I 0.738
SAMD4B Canis familiaris ENSCAFG00000005568 I 0.738
SAMD4A Canis familiaris ENSCAFG00000014940 I 0.852
SAMD4B Callithrix jacchus ENSCJAG00000014078 I 0.738
SAMD4A Callithrix jacchus ENSCJAG00000018182 I 0.852
ENSCPOG00000005932 Cavia porcellus ENSCPOG00000005932 I 0.738
SAMD4A Cavia porcellus ENSCPOG00000014637 I 0.852
ENSACAG00000008965 Anolis carolinensis ENSACAG00000008965 I 0.754
SAMD4B Homo sapiens ENSG00000179134 I 0.738
SAMD4A Microcebus murinus ENSMICG00000016212 I 0.852
SAMD4B Myotis lucifugus ENSMLUG00000002924 I 0.738
SAMD4A Myotis lucifugus ENSMLUG00000004192 I 0.852
SAMD4A Macaca mulatta ENSMMUG00000010315 I 0.852
SAMD4B Macaca mulatta ENSMMUG00000023802 I 0.738
SAMD4A Monodelphis domestica ENSMODG00000011669 I 0.852
ENSMODG00000013478 Monodelphis domestica ENSMODG00000013478 I 0.738
Samd4 Mus musculus ENSMUSG00000021838 I 0.852
SAMD4B Microcebus murinus ENSMICG00000006081 I 0.738
SAMD4A Meleagris gallopavo ENSMGAG00000013686 I 0.852
ENSGACG00000010797 Gasterosteus aculeatus ENSGACG00000010797 I 0.770
SAMD4A Gasterosteus aculeatus ENSGACG00000017331 I 0.852
SAMD4A Gallus gallus ENSGALG00000012203 I 0.852
SAMD4A Gorilla gorilla ENSGGOG00000000673 I 0.852
SAMD4B Gorilla gorilla ENSGGOG00000024088 I 0.738
SAMD4B Loxodonta africana ENSLAFG00000011957 I 0.738
SAMD4A Loxodonta africana ENSLAFG00000013245 I 0.852
SAMD4A Macropus eugenii ENSMEUG00000013419 I 0.852
SAMD4A Anolis carolinensis ENSACAG00000016355 I 0.869