ISCW008726 (Ixodes scapularis)
SAM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00536 (SAM_1) IPR021129 ISCW008726 T61838_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SAMD4A
M061_0.6 		Homo sapiens GCKGGHM RNAcompete
Ray et al.(2013)
RNCMPT00063 		0.705
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ISCW008726-PA SAM 426 485

Links

Other SAM family RBPs
Other Ixodes scapularis RBPs

76 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSMODG00000013478 Monodelphis domestica ENSMODG00000013478 I 0.738
e_gw.8.543.1 Branchiostoma floridae e_gw.8.543.1 I 0.738
SAMD4A Anolis carolinensis ENSACAG00000016355 I 0.738
SAMD4A Gasterosteus aculeatus ENSGACG00000017331 I 0.738
samd4a Xenopus tropicalis ENSXETG00000012217 I 0.733
ENSTGUG00000014163 Taeniopygia guttata ENSTGUG00000014163 I 0.733
SAMD4A Takifugu rubripes ENSTRUG00000015288 I 0.733
Samd4 Mus musculus ENSMUSG00000021838 I 0.733
SAMD4A Macaca mulatta ENSMMUG00000010315 I 0.721
SAMD4A Monodelphis domestica ENSMODG00000011669 I 0.721
SAMD4A Myotis lucifugus ENSMLUG00000004192 I 0.721
SAMD4A Meleagris gallopavo ENSMGAG00000013686 I 0.721
SAMD4A Loxodonta africana ENSLAFG00000013245 I 0.721
SAMD4A Oryctolagus cuniculus ENSOCUG00000003420 I 0.721
SAMD4A Macropus eugenii ENSMEUG00000013419 I 0.721
SAMD4A Gorilla gorilla ENSGGOG00000000673 I 0.721
SAMD4A Pan troglodytes ENSPTRG00000006364 I 0.721
SAMD4A Taeniopygia guttata ENSTGUG00000013086 I 0.721
SAMD4A Spermophilus tridecemlineatus ENSSTOG00000015276 I 0.721
ENSTNIG00000018801 Tetraodon nigroviridis ENSTNIG00000018801 I 0.721
SAMD4A Tarsius syrichta ENSTSYG00000010165 I 0.721
SAMD4A Tursiops truncatus ENSTTRG00000008280 I 0.721
SAMD4A Sus scrofa ENSSSCG00000005050 I 0.721
SAMD4A Sorex araneus ENSSARG00000014067 I 0.721
ENSPPYG00000005832 Pongo pygmaeus ENSPPYG00000005832 I 0.721
SAMD4A Gallus gallus ENSGALG00000012203 I 0.721
SAMD4A Pteropus vampyrus ENSPVAG00000016060 I 0.721
SMAG1_RAT Rattus norvegicus ENSRNOG00000010489 I 0.721
SAMD4A Procavia capensis ENSPCAG00000010880 I 0.721
SAMD4A Microcebus murinus ENSMICG00000016212 I 0.721
A6QPG4_BOVIN Bos taurus ENSBTAG00000001468 I 0.721
SAMD4A Erinaceus europaeus ENSEEUG00000005738 I 0.721
SAMD4A Dasypus novemcinctus ENSDNOG00000015876 I 0.721
SAMD4A Cavia porcellus ENSCPOG00000014637 I 0.721
SAMD4A Callithrix jacchus ENSCJAG00000018182 I 0.721
SAMD4A Canis familiaris ENSCAFG00000014940 I 0.721
AAH74364 Xenopus laevis AAH74364 I 0.721
SAMD4A Equus caballus ENSECAG00000010681 I 0.721
SAMD4A Echinops telfairi ENSETEG00000018627 I 0.721
Ame_R007760 Ailuropoda melanoleuca Ame_R007760 I 0.721
SAMD4A Felis catus ENSFCAG00000000005 I 0.721
SAMD4A Homo sapiens ENSG00000020577 D 0.721
ENSGACG00000010797 Gasterosteus aculeatus ENSGACG00000010797 I 0.717
ENSOPRG00000011493 Ochotona princeps ENSOPRG00000011493 I 0.717
SAMD4A Tupaia belangeri ENSTBEG00000010696 I 0.717
AAH89262 Xenopus laevis AAH89262 I 0.705
SAMD4B Vicugna pacos ENSVPAG00000011788 I 0.705
SAMD4B Sus scrofa ENSSSCG00000010706 I 0.705
SAMD4B Canis familiaris ENSCAFG00000005568 I 0.705
Ame_R016005 Ailuropoda melanoleuca Ame_R016005 I 0.705
SAMD4B Bos taurus ENSBTAG00000009785 I 0.705
AAH92035 Xenopus laevis AAH92035 I 0.705
Samd4b Rattus norvegicus ENSRNOG00000019831 I 0.705
SAMD4B Tupaia belangeri ENSTBEG00000003890 I 0.705
SAMD4B Tursiops truncatus ENSTTRG00000003554 I 0.705
Q5FWP2 Xenopus laevis Q5FWP2 I 0.705
SAMD4B Spermophilus tridecemlineatus ENSSTOG00000003379 I 0.705
ENSPPYG00000009963 Pongo pygmaeus ENSPPYG00000009963 I 0.705
SAMD4B Myotis lucifugus ENSMLUG00000002924 I 0.705
SAMD4B Echinops telfairi ENSETEG00000004346 I 0.705
SAMD4B Macaca mulatta ENSMMUG00000023802 I 0.705
SAMD4B Microcebus murinus ENSMICG00000006081 I 0.705
SAMD4B Homo sapiens ENSG00000179134 I 0.705
SAMD4B Gorilla gorilla ENSGGOG00000024088 I 0.705
SAMD4B Loxodonta africana ENSLAFG00000011957 I 0.705
SAMD4B Equus caballus ENSECAG00000015551 I 0.705
Samd4b Dipodomys ordii ENSDORG00000013482 I 0.705
ENSCPOG00000005932 Cavia porcellus ENSCPOG00000005932 I 0.705
SAMD4B Pan troglodytes ENSPTRG00000010961 I 0.705
SAMD4B Pteropus vampyrus ENSPVAG00000011118 I 0.705
SAMD4A Danio rerio ENSDARG00000075759 I 0.705
SAMD4B Procavia capensis ENSPCAG00000010263 I 0.705
SAMD4B Oryctolagus cuniculus ENSOCUG00000000343 I 0.705
SAMD4B Callithrix jacchus ENSCJAG00000014078 I 0.705
Samd4b Mus musculus ENSMUSG00000037513 I 0.705
SAMD4B Tarsius syrichta ENSTSYG00000003909 I 0.700