SAMD4A (Gasterosteus aculeatus)
SAM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00536 (SAM_1) IPR021129 ENSGACG00000017331 T61787_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SAMD4A
M061_0.6 		Homo sapiens GCKGGHM RNAcompete
Ray et al.(2013)
RNCMPT00063 		0.787
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000022889 SAM 244 304

Links

Other SAM family RBPs
Other Gasterosteus aculeatus RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SAMD4A Takifugu rubripes ENSTRUG00000015288 I 0.852
ENSTNIG00000018801 Tetraodon nigroviridis ENSTNIG00000018801 I 0.836
SAMD4A Danio rerio ENSDARG00000075759 I 0.820
SAMD4A Anolis carolinensis ENSACAG00000016355 I 0.820
Ame_R007760 Ailuropoda melanoleuca Ame_R007760 I 0.803
SAMD4A Tursiops truncatus ENSTTRG00000008280 I 0.803
SAMD4A Tarsius syrichta ENSTSYG00000010165 I 0.803
SAMD4A Spermophilus tridecemlineatus ENSSTOG00000015276 I 0.803
SAMD4A Gallus gallus ENSGALG00000012203 I 0.803
SAMD4A Taeniopygia guttata ENSTGUG00000013086 I 0.803
SAMD4A Canis familiaris ENSCAFG00000014940 I 0.803
SAMD4A Echinops telfairi ENSETEG00000018627 I 0.803
SAMD4A Felis catus ENSFCAG00000000005 I 0.803
SAMD4A Homo sapiens ENSG00000020577 D 0.803
SAMD4A Equus caballus ENSECAG00000010681 I 0.803
SAMD4A Dasypus novemcinctus ENSDNOG00000015876 I 0.803
SAMD4A Sus scrofa ENSSSCG00000005050 I 0.803
SAMD4A Callithrix jacchus ENSCJAG00000018182 I 0.803
SAMD4A Cavia porcellus ENSCPOG00000014637 I 0.803
A6QPG4_BOVIN Bos taurus ENSBTAG00000001468 I 0.803
ENSTGUG00000014163 Taeniopygia guttata ENSTGUG00000014163 I 0.803
SAMD4A Microcebus murinus ENSMICG00000016212 I 0.803
SAMD4A Meleagris gallopavo ENSMGAG00000013686 I 0.803
SAMD4A Myotis lucifugus ENSMLUG00000004192 I 0.803
SAMD4A Macaca mulatta ENSMMUG00000010315 I 0.803
SAMD4A Sorex araneus ENSSARG00000014067 I 0.803
SAMD4A Monodelphis domestica ENSMODG00000011669 I 0.803
SAMD4A Procavia capensis ENSPCAG00000010880 I 0.803
SAMD4A Oryctolagus cuniculus ENSOCUG00000003420 I 0.803
SMAG1_RAT Rattus norvegicus ENSRNOG00000010489 I 0.803
SAMD4A Gorilla gorilla ENSGGOG00000000673 I 0.803
SAMD4A Pteropus vampyrus ENSPVAG00000016060 I 0.803
SAMD4A Loxodonta africana ENSLAFG00000013245 I 0.803
SAMD4A Macropus eugenii ENSMEUG00000013419 I 0.803
SAMD4A Pan troglodytes ENSPTRG00000006364 I 0.803
Samd4 Mus musculus ENSMUSG00000021838 I 0.803
SAMD4A Erinaceus europaeus ENSEEUG00000005738 I 0.787
AAH89262 Xenopus laevis AAH89262 I 0.787
e_gw.8.543.1 Branchiostoma floridae e_gw.8.543.1 I 0.787
ENSPPYG00000005832 Pongo pygmaeus ENSPPYG00000005832 I 0.787
ENSOPRG00000011493 Ochotona princeps ENSOPRG00000011493 I 0.787
SAMD4A Tupaia belangeri ENSTBEG00000010696 I 0.787
Q5FWP2 Xenopus laevis Q5FWP2 I 0.787
samd4a Xenopus tropicalis ENSXETG00000012217 I 0.787
ISCW008726 Ixodes scapularis ISCW008726 I 0.738
ENSMODG00000013478 Monodelphis domestica ENSMODG00000013478 I 0.705
ENSTNIG00000016193 Tetraodon nigroviridis ENSTNIG00000016193 I 0.705
ENSTRUG00000006063 Takifugu rubripes ENSTRUG00000006063 I 0.705
ENSACAG00000008965 Anolis carolinensis ENSACAG00000008965 I 0.705
SAMD4A Oryzias latipes ENSORLG00000005039 I 0.705